RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 TMEM173Q86WV6 379 aaPredicted RBP18.03■□□□□ 0.48
CHGA-204ENST00000556076 CPB2Q96IY4 423 aa18.03■□□□□ 0.48
CHGA-204ENST00000556076 ZNF558Q96NG5 402 aa18.03■□□□□ 0.48
CHGA-204ENST00000556076 MTRQ99707 1265 aa18.03■□□□□ 0.48
CHGA-204ENST00000556076 JPH2Q9BR39 696 aaPredicted RBP18.03■□□□□ 0.48
CHGA-204ENST00000556076 TLE6Q9H808 572 aa18.03■□□□□ 0.48
CHGA-204ENST00000556076 GPRC5CQ9NQ84 441 aa18.03■□□□□ 0.48
CHGA-204ENST00000556076 CHST12Q9NRB3 414 aa18.03■□□□□ 0.48
CHGA-204ENST00000556076 AGPAT5Q9NUQ2 364 aa18.03■□□□□ 0.48
CHGA-204ENST00000556076 FAM105AQ9NUU6 356 aa18.03■□□□□ 0.48
CHGA-204ENST00000556076 RNF216Q9NWF9 866 aaPredicted RBP18.03■□□□□ 0.48
CHGA-204ENST00000556076 DACT1Q9NYF0 836 aa18.03■□□□□ 0.48
CHGA-204ENST00000556076 FAM86C2PA6NEL3 165 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 HOXA2O43364 376 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 USO1O60763 962 aaKnown RBP18.02■□□□□ 0.48
CHGA-204ENST00000556076 EOMESO95936 686 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 SSTR3P32745 418 aaPredicted RBP18.02■□□□□ 0.48
CHGA-204ENST00000556076 RARRES1P49788 294 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 CDC42EP1Q00587 391 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 CAPSQ13938 189 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 TTC38Q5R3I4 469 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 UBXN11Q5T124 520 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 POTEGQ6S5H5 508 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 FAM184AQ8NB25 1140 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 BCL7CQ8WUZ0 217 aaPredicted RBP18.02■□□□□ 0.48
CHGA-204ENST00000556076 GBP3Q9H0R5 595 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 UPF2Q9HAU5 1272 aaKnown RBP18.02■□□□□ 0.48
CHGA-204ENST00000556076 POLD4Q9HCU8 107 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 SH2B1Q9NRF2 756 aaPredicted RBP18.02■□□□□ 0.48
CHGA-204ENST00000556076 DNAJB4Q9UDY4 337 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 PCDHB2Q9Y5E7 798 aa18.02■□□□□ 0.48
CHGA-204ENST00000556076 FSCN2O14926 492 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 MBTPS2O43462 519 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 ZC3H11AO75152 810 aaKnown RBP eCLIP18.01■□□□□ 0.47
CHGA-204ENST00000556076 LYPLA2O95372 231 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 TOB1P50616 345 aaPredicted RBP18.01■□□□□ 0.47
CHGA-204ENST00000556076 BCAR1P56945 870 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 GNL2Q13823 731 aaKnown RBP18.01■□□□□ 0.47
CHGA-204ENST00000556076 LLGL2Q6P1M3 1020 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 AGMOQ6ZNB7 445 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 FAM43BQ6ZT52 329 aaPredicted RBP18.01■□□□□ 0.47
CHGA-204ENST00000556076 CDR2LQ86X02 465 aaPredicted RBP18.01■□□□□ 0.47
CHGA-204ENST00000556076 CATSPER3Q86XQ3 398 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 NOSTRINQ8IVI9 506 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 GJD3Q8N144 294 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 SLC39A11Q8N1S5 342 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 EFHBQ8N7U6 833 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 TCP11Q8WWU5 503 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 AUTS2Q8WXX7 1259 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 MRPS27Q92552 414 aaKnown RBP18.01■□□□□ 0.47
CHGA-204ENST00000556076 MSLNLQ96KJ4 702 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 TCF25Q9BQ70 676 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 EIF2AQ9BY44 585 aaKnown RBP18.01■□□□□ 0.47
CHGA-204ENST00000556076 INO80BQ9C086 356 aaPredicted RBP18.01■□□□□ 0.47
CHGA-204ENST00000556076 FOXP1Q9H334 677 aaPredicted RBP18.01■□□□□ 0.47
CHGA-204ENST00000556076 ANKEF1Q9NU02 776 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 TBC1D13Q9NVG8 400 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 SPG21Q9NZD8 308 aa18.01■□□□□ 0.47
CHGA-204ENST00000556076 B4GALT5O43286 388 aa18■□□□□ 0.47
CHGA-204ENST00000556076 TSPAN1O60635 241 aa18■□□□□ 0.47
CHGA-204ENST00000556076 OFD1O75665 1012 aa18■□□□□ 0.47
CHGA-204ENST00000556076 OR52Z1P0C646 297 aa18■□□□□ 0.47
CHGA-204ENST00000556076 GLRA2P23416 452 aa18■□□□□ 0.47
CHGA-204ENST00000556076 ARL2P36404 184 aa18■□□□□ 0.47
CHGA-204ENST00000556076 HMGN5P82970 282 aaKnown RBP18■□□□□ 0.47
CHGA-204ENST00000556076 UBE3AQ05086 875 aa18■□□□□ 0.47
CHGA-204ENST00000556076 ZP2Q05996 745 aa18■□□□□ 0.47
CHGA-204ENST00000556076 ECM1Q16610 540 aa18■□□□□ 0.47
CHGA-204ENST00000556076 SRGAP1Q7Z6B7 1085 aa18■□□□□ 0.47
CHGA-204ENST00000556076 ZNF280BQ86YH2 543 aa18■□□□□ 0.47
CHGA-204ENST00000556076 C4orf32Q8N8J7 132 aa18■□□□□ 0.47
CHGA-204ENST00000556076 APOL5Q9BWW9 433 aa18■□□□□ 0.47
CHGA-204ENST00000556076 POLR3FQ9H1D9 316 aaPredicted RBP18■□□□□ 0.47
CHGA-204ENST00000556076 RNF39Q9H2S5 420 aa18■□□□□ 0.47
CHGA-204ENST00000556076 NRDE2Q9H7Z3 1164 aa18■□□□□ 0.47
CHGA-204ENST00000556076 ENTPD7Q9NQZ7 604 aa18■□□□□ 0.47
CHGA-204ENST00000556076 CD207Q9UJ71 328 aa18■□□□□ 0.47
CHGA-204ENST00000556076 HES2Q9Y543 173 aa18■□□□□ 0.47
CHGA-204ENST00000556076 PPME1Q9Y570 386 aa18■□□□□ 0.47
CHGA-204ENST00000556076 INO80B-WBP1J3KQ70 363 aa17.99■□□□□ 0.47
CHGA-204ENST00000556076 NCK2O43639 380 aa17.99■□□□□ 0.47
CHGA-204ENST00000556076 PTENP60484 403 aa17.99■□□□□ 0.47
CHGA-204ENST00000556076 PLCB3Q01970 1234 aa17.99■□□□□ 0.47
CHGA-204ENST00000556076 DUSP6Q16828 381 aa17.99■□□□□ 0.47
CHGA-204ENST00000556076 NOMO2Q5JPE7 1267 aa17.99■□□□□ 0.47
CHGA-204ENST00000556076 EXOC8Q8IYI6 725 aa17.99■□□□□ 0.47
CHGA-204ENST00000556076 SMG8Q8ND04 991 aaKnown RBP17.99■□□□□ 0.47
CHGA-204ENST00000556076 CCDC43Q96MW1 224 aaKnown RBP17.99■□□□□ 0.47
CHGA-204ENST00000556076 TRAIPQ9BWF2 469 aa17.99■□□□□ 0.47
CHGA-204ENST00000556076 CDH22Q9UJ99 828 aa17.99■□□□□ 0.47
CHGA-204ENST00000556076 USP20Q9Y2K6 914 aa17.99■□□□□ 0.47
CHGA-204ENST00000556076 PCDHB6Q9Y5E3 794 aa17.99■□□□□ 0.47
CHGA-204ENST00000556076 ZNF623O75123 536 aa17.98■□□□□ 0.47
CHGA-204ENST00000556076 DGAT1O75907 488 aa17.98■□□□□ 0.47
CHGA-204ENST00000556076 DDHD2O94830 711 aa17.98■□□□□ 0.47
CHGA-204ENST00000556076 CA8P35219 290 aa17.98■□□□□ 0.47
CHGA-204ENST00000556076 SLC11A1P49279 550 aa17.98■□□□□ 0.47
CHGA-204ENST00000556076 MBTD1Q05BQ5 628 aa17.98■□□□□ 0.47
CHGA-204ENST00000556076 RABEP1Q15276 862 aa17.98■□□□□ 0.47
CHGA-204ENST00000556076 SMAD2Q15796 467 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms