RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 AKAP17AQ02040 695 aaKnown RBP16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 ITIH3Q06033 890 aa16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 PLA2G4FQ68DD2 849 aa16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 MOXD1Q6UVY6 613 aa16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 AGMOQ6ZNB7 445 aa16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 ZNF410Q86VK4 478 aa16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 LARP6Q9BRS8 491 aaKnown RBP16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 MINDY3Q9H8M7 445 aa16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 KCNMB3Q9NPA1 279 aa16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 FAM105AQ9NUU6 356 aa16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 SUCLA2Q9P2R7 463 aaPredicted RBP16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 RIF1Q5UIP0 2472 aaKnown RBP16.14■□□□□ 0.17
CHMP4BP1-201ENST00000556017 DTNBO60941 627 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 LILRB3O75022 631 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 DDHD2O94830 711 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 ASGR2P07307 311 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 HOXA11P31270 313 aaPredicted RBP16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 SLC11A1P49279 550 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 ALDH7A1P49419 539 aaKnown RBP16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 NPEPPSP55786 919 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 TPRNQ4KMQ1 711 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 UBXN11Q5T124 520 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 RARS2Q5T160 578 aaKnown RBP16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 KIAA1841Q6NSI8 718 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 RUFY3Q7L099 469 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 DDX53Q86TM3 631 aaKnown RBP16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 RHPN2Q8IUC4 686 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 BLIDQ8IZY5 108 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 TMEM169Q96HH4 297 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 SCLT1Q96NL6 688 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 PRRX2Q99811 253 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 SORCS3Q9UPU3 1222 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 PIN4Q9Y237 131 aaKnown RBP16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 DOCK8Q8NF50 2099 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 DCHS1Q96JQ0 3298 aa16.13■□□□□ 0.17
CHMP4BP1-201ENST00000556017 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 DDX11L8A8MPP1 907 aa16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 POLGP54098 1239 aaPredicted RBP16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 CDC42EP1Q00587 391 aa16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 PPP2R5CQ13362 524 aa16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 PTPN14Q15678 1187 aa16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 INF2Q27J81 1249 aa16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 NOMO2Q5JPE7 1267 aa16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 TWF2Q6IBS0 349 aaKnown RBP16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 MRPL10Q7Z7H8 261 aaKnown RBP16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 TMEM105Q8N8V8 129 aa16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 HAS1Q92839 578 aa16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 ZNF274Q96GC6 653 aaPredicted RBP16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 NECTIN4Q96NY8 510 aa16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 DHX33Q9H6R0 707 aaKnown RBP16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 TSHZ2Q9NRE2 1034 aa16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 GJB4Q9NTQ9 266 aa16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 AGPAT5Q9NUQ2 364 aa16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 NR2E1Q9Y466 385 aa16.12■□□□□ 0.17
CHMP4BP1-201ENST00000556017 EFEMP2O95967 443 aa16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 SFPQP23246 707 aaKnown RBP eCLIP16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 PSMA5P28066 241 aa16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 SSRP1Q08945 709 aaKnown RBP16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 SPIRE1Q08AE8 756 aa16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 ZDHHC14Q8IZN3 488 aa16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 NLRP4Q96MN2 994 aa16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 CYP26B1Q9NR63 512 aa16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 DDX25Q9UHL0 483 aaKnown RBP16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 KCNJ14Q9UNX9 436 aa16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 INPP5FQ9Y2H2 1132 aa16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 PCDHB2Q9Y5E7 798 aa16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 TDRD15B5MCY1 1934 aaKnown RBP16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 FAM186AA6NE01 2351 aa16.11■□□□□ 0.17
CHMP4BP1-201ENST00000556017 MTCL1Q9Y4B5 1905 aaKnown RBP16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 PTPRZ1P23471 2315 aaPredicted RBP16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 H0Y858 1186 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 ZBTB39O15060 712 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 DEXIO95424 95 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 MTHFRP42898 656 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 PSMC5P62195 406 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 EARS2Q5JPH6 523 aaKnown RBP16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 CES5AQ6NT32 575 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 GLB1LQ6UWU2 654 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 CATSPER4Q7RTX7 472 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 UBALD2Q8IYN6 164 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 PRPF31Q8WWY3 499 aaKnown RBP16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 RSPH1Q8WYR4 309 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 PHF20Q9BVI0 1012 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 C22orf23Q9BZE7 217 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 DZANK1Q9NVP4 752 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 COL4A3BPQ9Y5P4 624 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 DOCK6Q96HP0 2047 aa16.1■□□□□ 0.17
CHMP4BP1-201ENST00000556017 ZNF292O60281 2723 aa16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 GALR2O43603 387 aaPredicted RBP16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 DNM2P50570 870 aa16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 CLCN4P51793 760 aa16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 MTMR3Q13615 1198 aa16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 NONOQ15233 471 aaKnown RBP eCLIP16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 TMC5Q6UXY8 1006 aa16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 RNF168Q8IYW5 571 aaPredicted RBP16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 SMG8Q8ND04 991 aaKnown RBP16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 OXER1Q8TDS5 423 aa16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 TMEM143Q96AN5 459 aa16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 KLHL5Q96PQ7 755 aa16.09■□□□□ 0.17
CHMP4BP1-201ENST00000556017 TM6SF1Q9BZW5 370 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms