RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 TMEM169Q96HH4 297 aa12.88□□□□□ -0.35
LRP1-209ENST00000555941 CEP170P1Q96L14 293 aa12.88□□□□□ -0.35
LRP1-209ENST00000555941 DHX33Q9H6R0 707 aaKnown RBP12.88□□□□□ -0.35
LRP1-209ENST00000555941 FAM105AQ9NUU6 356 aa12.88□□□□□ -0.35
LRP1-209ENST00000555941 TPCN1Q9ULQ1 816 aa12.88□□□□□ -0.35
LRP1-209ENST00000555941 PIN4Q9Y237 131 aaKnown RBP12.88□□□□□ -0.35
LRP1-209ENST00000555941 COL4A3BPQ9Y5P4 624 aa12.88□□□□□ -0.35
LRP1-209ENST00000555941 IRAK3Q9Y616 596 aa12.88□□□□□ -0.35
LRP1-209ENST00000555941 C2orf71A6NGG8 1288 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 NEFLP07196 543 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 ZXDAP98168 799 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 RBM10P98175 930 aaKnown RBP12.87□□□□□ -0.35
LRP1-209ENST00000555941 ITIH3Q06033 890 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 NOMO2Q5JPE7 1267 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 CES5AQ6NT32 575 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 SYCE2Q6PIF2 218 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 TRIM67Q6ZTA4 783 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 PIK3AP1Q6ZUJ8 805 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 DDX53Q86TM3 631 aaKnown RBP12.87□□□□□ -0.35
LRP1-209ENST00000555941 HAS1Q92839 578 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 RPGRIP1Q96KN7 1286 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 NLRP4Q96MN2 994 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 NECTIN4Q96NY8 510 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 SH2D3AQ9BRG2 576 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 ZSWIM4Q9H7M6 989 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 IFT122Q9HBG6 1241 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 BRMS1Q9HCU9 246 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 AGPAT5Q9NUQ2 364 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 KANSL3Q9P2N6 904 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 CNTNAP2Q9UHC6 1331 aa12.87□□□□□ -0.35
LRP1-209ENST00000555941 ZNF318Q5VUA4 2279 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 TECTAO75443 2155 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 CXCL14O95715 111 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 YWHABP31946 246 aaKnown RBP12.86□□□□□ -0.35
LRP1-209ENST00000555941 PBX3P40426 434 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 NPEPPSP55786 919 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 RNASELQ05823 741 aaKnown RBP12.86□□□□□ -0.35
LRP1-209ENST00000555941 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 MRPL10Q7Z7H8 261 aaKnown RBP12.86□□□□□ -0.35
LRP1-209ENST00000555941 KSR1Q8IVT5 923 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 CNNM3Q8NE01 707 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 PRPF31Q8WWY3 499 aaKnown RBP12.86□□□□□ -0.35
LRP1-209ENST00000555941 IGSF21Q96ID5 467 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 PRRX2Q99811 253 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 ADAM7Q9H2U9 754 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 TBC1D13Q9NVG8 400 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 DZANK1Q9NVP4 752 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 ORC3Q9UBD5 711 aaPredicted RBP12.86□□□□□ -0.35
LRP1-209ENST00000555941 NR2E1Q9Y466 385 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 PCDHB2Q9Y5E7 798 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 HCFC2Q9Y5Z7 792 aa12.86□□□□□ -0.35
LRP1-209ENST00000555941 TMEM221A6NGB7 291 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 M0R296 226 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 CLASP2O75122 1294 aaKnown RBP12.85□□□□□ -0.35
LRP1-209ENST00000555941 ZC3H11AO75152 810 aaKnown RBP eCLIP12.85□□□□□ -0.35
LRP1-209ENST00000555941 OFD1O75665 1012 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 GALTP07902 379 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 CTSAP10619 480 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 KRT2P35908 639 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 POU5F1BQ06416 359 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 SIGLEC14Q08ET2 396 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 NCBP1Q09161 790 aaKnown RBP12.85□□□□□ -0.35
LRP1-209ENST00000555941 LAMTOR4Q0VGL1 99 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 MXD4Q14582 209 aaPredicted RBP12.85□□□□□ -0.35
LRP1-209ENST00000555941 LLGL2Q6P1M3 1020 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 PPFIBP1Q86W92 1011 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 VPS52Q8N1B4 723 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 TMEM87AQ8NBN3 555 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 URGCPQ8TCY9 931 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 OXER1Q8TDS5 423 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 PBXIP1Q96AQ6 731 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 LXNQ9BS40 222 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 ZBP1Q9H171 429 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 NRDE2Q9H7Z3 1164 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 UBN1Q9NPG3 1134 aa12.85□□□□□ -0.35
LRP1-209ENST00000555941 NT5C1B-RDH14C9J2C7 533 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 LYPLA2O95372 231 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 CTDNEP1O95476 244 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 SRGAP2CP0DJJ0 459 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 AXLP30530 894 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 MTHFRP42898 656 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 AK2P54819 239 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 SPIRE1Q08AE8 756 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 EMC2Q15006 297 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 PTPN21Q16825 1174 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 XKR9Q5GH70 373 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 NCAPH2Q6IBW4 605 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 FERMT3Q86UX7 667 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 POTEDQ86YR6 584 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 ZNF579Q8NAF0 562 aaKnown RBP12.84□□□□□ -0.35
LRP1-209ENST00000555941 TNFRSF25Q93038 417 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 LPPQ93052 612 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 TMEM143Q96AN5 459 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 CCDC51Q96ER9 411 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 FBXL18Q96ME1 805 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 RIPOR3Q96MK2 946 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 TMEM175Q9BSA9 504 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 RGL1Q9NZL6 768 aa12.84□□□□□ -0.35
LRP1-209ENST00000555941 WRAP73Q9P2S5 460 aaPredicted RBP12.84□□□□□ -0.35
LRP1-209ENST00000555941 PCDHA12Q9UN75 941 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms