RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 CSDE1O75534 798 aaKnown RBP14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 HOXB8P17481 243 aaPredicted RBP14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 ALDH7A1P49419 539 aaKnown RBP14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 NPEPPSP55786 919 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 POU5F1BQ06416 359 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 CBX2Q14781 532 aaPredicted RBP14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 GLB1LQ6UWU2 654 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 CATSPER4Q7RTX7 472 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 RNF169Q8NCN4 708 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 HELQQ8TDG4 1101 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 PRPF31Q8WWY3 499 aaKnown RBP14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 SUSD6Q92537 303 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 PGBD4Q96DM1 585 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 HSD17B14Q9BPX1 270 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 ENTPD7Q9NQZ7 604 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 BARX2Q9UMQ3 279 aaPredicted RBP14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 PCDHA12Q9UN75 941 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 USP15Q9Y4E8 981 aaPredicted RBP14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 IRAK3Q9Y616 596 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 TRIOO75962 3097 aa14.19□□□□□ -0.14
HNRNPC-221ENST00000555883 PER2O15055 1255 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 SLITRK3O94933 977 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 LARGE1O95461 756 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 NEK4P51957 841 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 BCAR1P56945 870 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 LAMTOR4Q0VGL1 99 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 TRIM29Q14134 588 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 GIT2Q14161 759 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 MXD4Q14582 209 aaPredicted RBP14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 SMC1AQ14683 1233 aaKnown RBP14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 BMS1Q14692 1282 aaKnown RBP14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 EMC2Q15006 297 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 NCAPH2Q6IBW4 605 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 MRPL10Q7Z7H8 261 aaKnown RBP14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 IFNLR1Q8IU57 520 aaPredicted RBP14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 KSR1Q8IVT5 923 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 DIS3L2Q8IYB7 885 aaKnown RBP14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 MRPL43Q8N983 215 aaKnown RBP14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 NECAB1Q8N987 351 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 ZNF579Q8NAF0 562 aaKnown RBP14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 VN1R2Q8NFZ6 395 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 DYDC2Q96IM9 177 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 PHF7Q9BWX1 381 aaPredicted RBP14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 ANKEF1Q9NU02 776 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 RGL1Q9NZL6 768 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 RAPGEFL1Q9UHV5 662 aa14.18□□□□□ -0.14
HNRNPC-221ENST00000555883 CNTNAP2Q9UHC6 1331 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 FAM86C2PA6NEL3 165 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 FAM205CA6NFA0 338 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 BTBD18B2RXH4 712 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 NEMFO60524 1076 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 XRCC6P12956 609 aaKnown RBP eCLIP14.17□□□□□ -0.143e-6■□□□□ 10.7
HNRNPC-221ENST00000555883 AXLP30530 894 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 HOXA11P31270 313 aaPredicted RBP14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 ORC2Q13416 577 aaPredicted RBP14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 CALCRLQ16602 461 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 NOMO2Q5JPE7 1267 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 PLPP4Q5VZY2 271 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 TMC7Q7Z402 723 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 FERMT3Q86UX7 667 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 RNF135Q8IUD6 432 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 CNNM3Q8NE01 707 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 CCDC51Q96ER9 411 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 TMEM169Q96HH4 297 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 MTMR9Q96QG7 549 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 MTRQ99707 1265 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 EIF2AK1Q9BQI3 630 aaKnown RBP14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 NFKBIZQ9BYH8 718 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 S1PR5Q9H228 398 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 KCNH6Q9H252 994 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 TTC12Q9H892 705 aaPredicted RBP14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 UBN1Q9NPG3 1134 aa14.17□□□□□ -0.14
HNRNPC-221ENST00000555883 C2orf71A6NGG8 1288 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 HIDE1A8MVS5 230 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 INPPL1O15357 1258 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 OFD1O75665 1012 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 DGAT1O75907 488 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 PBX3P40426 434 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 XKR9Q5GH70 373 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 ANKRD54Q6NXT1 300 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 DDX53Q86TM3 631 aaKnown RBP14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 RNF149Q8NC42 400 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 CASP10Q92851 521 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 TMEM143Q96AN5 459 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 FAM122AQ96E09 287 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 LLPHQ9BRT6 129 aaKnown RBP14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 TBC1D13Q9NVG8 400 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 KANSL3Q9P2N6 904 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 PCDHB2Q9Y5E7 798 aa14.16□□□□□ -0.14
HNRNPC-221ENST00000555883 JAK2O60674 1132 aa14.15□□□□□ -0.14
HNRNPC-221ENST00000555883 ZC3H11AO75152 810 aaKnown RBP eCLIP14.15□□□□□ -0.145e-13■■□□□ 12.3
HNRNPC-221ENST00000555883 SRGAP2CP0DJJ0 459 aa14.15□□□□□ -0.14
HNRNPC-221ENST00000555883 NCLP19338 710 aaKnown RBP14.15□□□□□ -0.14
HNRNPC-221ENST00000555883 PTENP60484 403 aa14.15□□□□□ -0.14
HNRNPC-221ENST00000555883 CYP4A11Q02928 519 aa14.15□□□□□ -0.14
HNRNPC-221ENST00000555883 ITIH3Q06033 890 aa14.15□□□□□ -0.14
HNRNPC-221ENST00000555883 TFDP1Q14186 410 aa14.15□□□□□ -0.14
HNRNPC-221ENST00000555883 CTTNQ14247 550 aaKnown RBP14.15□□□□□ -0.14
HNRNPC-221ENST00000555883 TPRNQ4KMQ1 711 aa14.15□□□□□ -0.14
HNRNPC-221ENST00000555883 SYCE2Q6PIF2 218 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms