RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 NFS1Q9Y697 457 aa11.13□□□□□ -0.63
EFCAB11-208ENST00000555872 MYH13Q9UKX3 1938 aa11.13□□□□□ -0.63
EFCAB11-208ENST00000555872 NPTXRO95502 500 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 DDX58O95786 925 aaKnown RBP11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 IFIT1P09914 478 aaKnown RBP11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 ETFBP38117 255 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 STAT6P42226 847 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 TUBP50607 506 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 FKBP4Q02790 459 aaKnown RBP eCLIP11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 GBE1Q04446 702 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 TYW1BQ6NUM6 668 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 ZNF449Q6P9G9 518 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 CCDC174Q6PII3 467 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 MCF2L2Q86YR7 1114 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 UBLCP1Q8WVY7 318 aaPredicted RBP11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 UBAC1Q9BSL1 405 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 DISC1Q9NRI5 854 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 SALL4Q9UJQ4 1053 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 BUB1O43683 1085 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 CHKAP35790 457 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 MTTPP55157 894 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 C6orf183Q5T699 404 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 DUS1LQ6P1R4 473 aaKnown RBP11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 TRPM8Q7Z2W7 1104 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 KLHL7Q8IXQ5 586 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 KIF2BQ8N4N8 673 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 SLAIN1Q8ND83 568 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 OXER1Q8TDS5 423 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 NLRP3Q96P20 1036 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 XPO6Q96QU8 1125 aaKnown RBP11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 HNRNPABQ99729 332 aaKnown RBP11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 PFDN4Q9NQP4 134 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 MTUS1Q9ULD2 1270 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 AFF2P51816 1311 aa11.12□□□□□ -0.63
EFCAB11-208ENST00000555872 NEURL1BA8MQ27 555 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 IGF2BP3O00425 579 aaKnown RBP eCLIP11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 RAD51CO43502 376 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 TSPAN1O60635 241 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 KATNA1O75449 491 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 ALDH2P05091 517 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 PDHA1P08559 390 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 PRCPP42785 496 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 CD97P48960 835 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 RCAN1P53805 252 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 LAPTM5Q13571 262 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 SIM2Q14190 667 aaPredicted RBP11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 GCKRQ14397 625 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 RNF10Q8N5U6 811 aaKnown RBP11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 C8orf37Q96NL8 207 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 PSKH2Q96QS6 385 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 ELAC2Q9BQ52 826 aaKnown RBP11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 PARVGQ9HBI0 331 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 FAM217BQ9NTX9 383 aaPredicted RBP11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 XDHP47989 1333 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 C4AP0C0L4 1744 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 C4BP0C0L5 1744 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 TJP1Q07157 1748 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 H7C1D1 291 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 ARHGAP33O14559 1287 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 HSD17B7P56937 341 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 LRP10Q7Z4F1 713 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 ZNF554Q86TJ5 538 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 DDX42Q86XP3 938 aaKnown RBP eCLIP11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 LRRC43Q8N309 656 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 SPERTQ8NA61 448 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 BRSK1Q8TDC3 778 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 GLMNQ92990 594 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 UQCC2Q9BRT2 126 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 MFRPQ9BY79 579 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 TTYH3Q9C0H2 523 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 TPK1Q9H3S4 243 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 FKBP14Q9NWM8 211 aa11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 AFDNP55196 1824 aaKnown RBP11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 MYO5AQ9Y4I1 1855 aaKnown RBP11.11□□□□□ -0.63
EFCAB11-208ENST00000555872 LOC105371267A0A1B0GV96 52 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 FAM205CA6NFA0 338 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 UBOX5O94941 541 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 KRT16P08779 473 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 ANXA13P27216 316 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 ETV3P41162 512 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 DNM2P50570 870 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 PMS1P54277 932 aaKnown RBP11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 UBXN2AP68543 259 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 KRT71Q3SY84 523 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 ERMARDQ5T6L9 678 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 KLHDC7AQ5VTJ3 777 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 ANO7Q6IWH7 933 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 SNX32Q86XE0 403 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 TRIML2Q8N7C3 387 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 CNBD1Q8NA66 436 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 PIGBQ92521 554 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 SH3KBP1Q96B97 665 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 FERD3LQ96RJ6 166 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 MYD88Q99836 296 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 FOXP1Q9H334 677 aaPredicted RBP11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 CNNM2Q9H8M5 875 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 CLEC11AQ9Y240 323 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 A6NJR5 290 aa11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
EFCAB11-208ENST00000555872 B4E1Z4 1266 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms