RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 ECHDC2Q86YB7 292 aa25.31■■□□□ 1.64
CDKN3-208ENST00000555837 CRIPAKQ8N1N5 446 aa25.31■■□□□ 1.64
CDKN3-208ENST00000555837 SYT2Q8N9I0 419 aaPredicted RBP25.31■■□□□ 1.64
CDKN3-208ENST00000555837 SPRYD3Q8NCJ5 442 aa25.31■■□□□ 1.64
CDKN3-208ENST00000555837 FBXO22Q8NEZ5 403 aa25.31■■□□□ 1.64
CDKN3-208ENST00000555837 MYLIPQ8WY64 445 aa25.31■■□□□ 1.64
CDKN3-208ENST00000555837 PLVAPQ9BX97 442 aa25.31■■□□□ 1.64
CDKN3-208ENST00000555837 UBN1Q9NPG3 1134 aa25.31■■□□□ 1.64
CDKN3-208ENST00000555837 PTPRSQ13332 1948 aa25.31■■□□□ 1.64
CDKN3-208ENST00000555837 LCHNA4D1U4 455 aa25.3■■□□□ 1.64
CDKN3-208ENST00000555837 PPP6R2O75170 966 aa25.3■■□□□ 1.64
CDKN3-208ENST00000555837 SSBP05455 408 aaKnown RBP eCLIP25.3■■□□□ 1.64
CDKN3-208ENST00000555837 GUCY2CP25092 1073 aa25.3■■□□□ 1.64
CDKN3-208ENST00000555837 DMP1Q13316 513 aaPredicted RBP25.3■■□□□ 1.64
CDKN3-208ENST00000555837 MAPK6Q16659 721 aa25.3■■□□□ 1.64
CDKN3-208ENST00000555837 PTPROQ16827 1216 aa25.3■■□□□ 1.64
CDKN3-208ENST00000555837 KCNG4Q8TDN1 519 aa25.3■■□□□ 1.64
CDKN3-208ENST00000555837 ASAP3Q8TDY4 903 aa25.3■■□□□ 1.64
CDKN3-208ENST00000555837 USP28Q96RU2 1077 aa25.3■■□□□ 1.64
CDKN3-208ENST00000555837 C11orf84Q9BUA3 381 aaPredicted RBP25.3■■□□□ 1.64
CDKN3-208ENST00000555837 MRPL9Q9BYD2 267 aaKnown RBP25.3■■□□□ 1.64
CDKN3-208ENST00000555837 TMEM117Q9H0C3 514 aa25.3■■□□□ 1.64
CDKN3-208ENST00000555837 RBM19Q9Y4C8 960 aaKnown RBP25.3■■□□□ 1.64
CDKN3-208ENST00000555837 H0YCG3 227 aa25.29■■□□□ 1.64
CDKN3-208ENST00000555837 SPTLC2O15270 562 aa25.29■■□□□ 1.64
CDKN3-208ENST00000555837 ZNF623O75123 536 aa25.29■■□□□ 1.64
CDKN3-208ENST00000555837 CSDE1O75534 798 aaKnown RBP25.29■■□□□ 1.64
CDKN3-208ENST00000555837 PLA2G4BP0C869 781 aa25.29■■□□□ 1.64
CDKN3-208ENST00000555837 POU3F3P20264 500 aaPredicted RBP25.29■■□□□ 1.64
CDKN3-208ENST00000555837 FGFR4P22455 802 aa25.29■■□□□ 1.64
CDKN3-208ENST00000555837 IGFBP4P22692 258 aa25.29■■□□□ 1.64
CDKN3-208ENST00000555837 MARCKSP29966 332 aaPredicted RBP25.29■■□□□ 1.64
CDKN3-208ENST00000555837 ABCD1P33897 745 aa25.29■■□□□ 1.64
CDKN3-208ENST00000555837 SMTNP53814 917 aa25.29■■□□□ 1.64
CDKN3-208ENST00000555837 TMEM119Q4V9L6 283 aa25.29■■□□□ 1.64
CDKN3-208ENST00000555837 RINT1Q6NUQ1 792 aa25.29■■□□□ 1.64
CDKN3-208ENST00000555837 TMEM192Q8IY95 271 aa25.29■■□□□ 1.64
CDKN3-208ENST00000555837 CLP1Q92989 425 aaKnown RBP25.29■■□□□ 1.64
CDKN3-208ENST00000555837 FAM105AQ9NUU6 356 aa25.29■■□□□ 1.64
CDKN3-208ENST00000555837 STK17AQ9UEE5 414 aa25.29■■□□□ 1.64
CDKN3-208ENST00000555837 IBSPP21815 317 aaPredicted RBP25.28■■□□□ 1.64
CDKN3-208ENST00000555837 GRB10Q13322 594 aa25.28■■□□□ 1.64
CDKN3-208ENST00000555837 TMEM132AQ24JP5 1023 aa25.28■■□□□ 1.64
CDKN3-208ENST00000555837 SPOUT1Q5T280 376 aaKnown RBP25.28■■□□□ 1.64
CDKN3-208ENST00000555837 CDCA2Q69YH5 1023 aaPredicted RBP25.28■■□□□ 1.64
CDKN3-208ENST00000555837 FAM173BQ6P4H8 233 aa25.28■■□□□ 1.64
CDKN3-208ENST00000555837 CCDC73Q6ZRK6 1079 aa25.28■■□□□ 1.64
CDKN3-208ENST00000555837 TRIM6Q9C030 488 aaPredicted RBP25.28■■□□□ 1.64
CDKN3-208ENST00000555837 CSRNP2Q9H175 543 aa25.28■■□□□ 1.64
CDKN3-208ENST00000555837 RC3H2Q9HBD1 1191 aaKnown RBP25.28■■□□□ 1.64
CDKN3-208ENST00000555837 GPRC5CQ9NQ84 441 aa25.28■■□□□ 1.64
CDKN3-208ENST00000555837 LARSQ9P2J5 1176 aaKnown RBP25.28■■□□□ 1.64
CDKN3-208ENST00000555837 FBXO2Q9UK22 296 aaPredicted RBP25.28■■□□□ 1.64
CDKN3-208ENST00000555837 PCDHB12Q9Y5F1 795 aa25.28■■□□□ 1.64
CDKN3-208ENST00000555837 MBTD1Q05BQ5 628 aa25.27■■□□□ 1.64
CDKN3-208ENST00000555837 FAM187BQ17R55 369 aa25.27■■□□□ 1.64
CDKN3-208ENST00000555837 EPC2Q52LR7 807 aa25.27■■□□□ 1.64
CDKN3-208ENST00000555837 GLB1LQ6UWU2 654 aa25.27■■□□□ 1.64
CDKN3-208ENST00000555837 PPP4R3CPQ6ZMV5 832 aa25.27■■□□□ 1.64
CDKN3-208ENST00000555837 C1orf186Q6ZWK4 172 aa25.27■■□□□ 1.64
CDKN3-208ENST00000555837 RNF169Q8NCN4 708 aa25.27■■□□□ 1.64
CDKN3-208ENST00000555837 LINC00301Q8NCQ3 95 aa25.27■■□□□ 1.64
CDKN3-208ENST00000555837 PNMA5Q96PV4 448 aa25.27■■□□□ 1.64
CDKN3-208ENST00000555837 ODF2LQ9ULJ1 636 aa25.27■■□□□ 1.64
CDKN3-208ENST00000555837 CNTNAP2Q9UHC6 1331 aa25.27■■□□□ 1.64
CDKN3-208ENST00000555837 TBKBP1A7MCY6 615 aa25.26■■□□□ 1.63
CDKN3-208ENST00000555837 C5orf67F2Z3F1 127 aa25.26■■□□□ 1.63
CDKN3-208ENST00000555837 KRT18P05783 430 aaKnown RBP25.26■■□□□ 1.63
CDKN3-208ENST00000555837 CTNNB1P35222 781 aa25.26■■□□□ 1.63
CDKN3-208ENST00000555837 DDIT3P35638 169 aa25.26■■□□□ 1.63
CDKN3-208ENST00000555837 BMPR1AP36894 532 aa25.26■■□□□ 1.63
CDKN3-208ENST00000555837 RRAGBQ5VZM2 374 aa25.26■■□□□ 1.63
CDKN3-208ENST00000555837 LRRC43Q8N309 656 aa25.26■■□□□ 1.63
CDKN3-208ENST00000555837 P2RX5Q93086 422 aa25.26■■□□□ 1.63
CDKN3-208ENST00000555837 ADPGKQ9BRR6 497 aa25.26■■□□□ 1.63
CDKN3-208ENST00000555837 LMAN2LQ9H0V9 348 aa25.26■■□□□ 1.63
CDKN3-208ENST00000555837 MINDY3Q9H8M7 445 aa25.26■■□□□ 1.63
CDKN3-208ENST00000555837 CERS4Q9HA82 394 aa25.26■■□□□ 1.63
CDKN3-208ENST00000555837 KANSL3Q9P2N6 904 aa25.26■■□□□ 1.63
CDKN3-208ENST00000555837 SZT2Q5T011 3432 aa25.25■■□□□ 1.63
CDKN3-208ENST00000555837 CCDC169A6NNP5 214 aa25.25■■□□□ 1.63
CDKN3-208ENST00000555837 K7ERI5 159 aa25.25■■□□□ 1.63
CDKN3-208ENST00000555837 TSPAN1O60635 241 aa25.25■■□□□ 1.63
CDKN3-208ENST00000555837 SLC17A8Q8NDX2 589 aa25.25■■□□□ 1.63
CDKN3-208ENST00000555837 MAFAQ8NHW3 353 aaPredicted RBP25.25■■□□□ 1.63
CDKN3-208ENST00000555837 URGCPQ8TCY9 931 aa25.25■■□□□ 1.63
CDKN3-208ENST00000555837 LARP4BQ92615 738 aaKnown RBP25.25■■□□□ 1.63
CDKN3-208ENST00000555837 PYM1Q9BRP8 204 aaKnown RBP25.25■■□□□ 1.63
CDKN3-208ENST00000555837 LRRC27Q9C0I9 530 aa25.25■■□□□ 1.63
CDKN3-208ENST00000555837 MTUS1Q9ULD2 1270 aa25.25■■□□□ 1.63
CDKN3-208ENST00000555837 PCDHB2Q9Y5E7 798 aa25.25■■□□□ 1.63
CDKN3-208ENST00000555837 H3BNC9 293 aa25.24■■□□□ 1.63
CDKN3-208ENST00000555837 N4BP3O15049 544 aa25.24■■□□□ 1.63
CDKN3-208ENST00000555837 CUTAO60888 179 aa25.24■■□□□ 1.63
CDKN3-208ENST00000555837 HIP1RO75146 1068 aa25.24■■□□□ 1.63
CDKN3-208ENST00000555837 LAG3P18627 525 aa25.24■■□□□ 1.63
CDKN3-208ENST00000555837 PLCG1P19174 1290 aa25.24■■□□□ 1.63
CDKN3-208ENST00000555837 SLC12A3P55017 1021 aa25.24■■□□□ 1.63
CDKN3-208ENST00000555837 PRPF4BQ13523 1007 aaKnown RBP25.24■■□□□ 1.63
CDKN3-208ENST00000555837 KARSQ15046 597 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms