RNA–Protein interactions for RNA: ENST00000555830.1

SDR39U1-215, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 418 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-215ENST00000555830 LRRC43Q8N309 656 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 SPRYD3Q8NCJ5 442 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 HELQQ8TDG4 1101 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 CLP1Q92989 425 aaKnown RBP17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 PGBD4Q96DM1 585 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 CALML4Q96GE6 196 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 PLIN2Q99541 437 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 PLVAPQ9BX97 442 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 TRIM6Q9C030 488 aaPredicted RBP17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 NT5C3AQ9H0P0 336 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 MINDY3Q9H8M7 445 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 FAM105AQ9NUU6 356 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 LMCD1Q9NZU5 365 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 INPP5FQ9Y2H2 1132 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 MYH11P35749 1972 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 COL6A3P12111 3177 aa17.38■□□□□ 0.37
SDR39U1-215ENST00000555830 EYA4O95677 639 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 EOMESO95936 686 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 LAG3P18627 525 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 CYP11B2P19099 503 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 UBA7P41226 1012 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 FAM189BP81408 668 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 NOTUMQ6P988 496 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 GLB1LQ6UWU2 654 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 EP400NLQ6ZTU2 488 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 CABP7Q86V35 215 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 LPPQ93052 612 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 MRPL38Q96DV4 380 aaKnown RBP17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 CPB2Q96IY4 423 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 MRPL9Q9BYD2 267 aaKnown RBP17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 C2orf40Q9H1Z8 148 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 PRDM6Q9NQX0 595 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 CDH23Q9H251 3354 aa17.37■□□□□ 0.37
SDR39U1-215ENST00000555830 TRANK1O15050 2925 aa17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 POU3F3P20264 500 aaPredicted RBP17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 AXLP30530 894 aa17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 RNASELQ05823 741 aaKnown RBP17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 RESTQ13127 1097 aa17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 PCBP1Q15365 356 aaKnown RBP eCLIP17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 FOXD4L5Q5VV16 416 aaPredicted RBP17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 HACE1Q8IYU2 909 aa17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 CRIPAKQ8N1N5 446 aa17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 URGCPQ8TCY9 931 aa17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 FOXD4L4Q8WXT5 416 aaPredicted RBP17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 KIFAP3Q92845 792 aa17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 AK8Q96MA6 479 aa17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 ZSCAN16Q9H4T2 348 aaPredicted RBP17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 ALG13Q9NP73 1137 aaKnown RBP17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 TYW1Q9NV66 732 aaKnown RBP17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 PCDHB2Q9Y5E7 798 aa17.36■□□□□ 0.37
SDR39U1-215ENST00000555830 PLXNA4Q9HCM2 1894 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 C5orf67F2Z3F1 127 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 TSPAN1O60635 241 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 MBTD1Q05BQ5 628 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 POU5F1BQ06416 359 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 CSPP1Q1MSJ5 1256 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 KLHL23Q8NBE8 558 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 COLGALT1Q8NBJ5 622 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 CASD1Q96PB1 797 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 APOL6Q9BWW8 343 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 LMAN2LQ9H0V9 348 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 PRMT7Q9NVM4 692 aaPredicted RBP17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 HCSTQ9UBK5 93 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 MTMR6Q9Y217 621 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 CLIC4Q9Y696 253 aa17.35■□□□□ 0.37
SDR39U1-215ENST00000555830 CCDC169A6NNP5 214 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 GRM6O15303 877 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 MARCKSP29966 332 aaPredicted RBP17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 LONP1P36776 959 aaKnown RBP17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 TXLNAP40222 546 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 NAMPTP43490 491 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 DMP1Q13316 513 aaPredicted RBP17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 MAPK6Q16659 721 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 NAALADL2Q58DX5 795 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 CLLU1OSQ5K130 101 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 FAM173BQ6P4H8 233 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 P2RX5Q93086 422 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 PPP2R3CQ969Q6 453 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 CCDC51Q96ER9 411 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 DRC1Q96MC2 740 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 ZNF558Q96NG5 402 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 MMTAG2Q9BU76 263 aaKnown RBP17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 GBP3Q9H0R5 595 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 NSUN3Q9H649 340 aaKnown RBP17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 POLD4Q9HCU8 107 aa17.34■□□□□ 0.37
SDR39U1-215ENST00000555830 ATG2AQ2TAZ0 1938 aa17.33■□□□□ 0.37
SDR39U1-215ENST00000555830 HIP1RO75146 1068 aa17.33■□□□□ 0.36
SDR39U1-215ENST00000555830 ZC3H11AO75152 810 aaKnown RBP eCLIP17.33■□□□□ 0.36
SDR39U1-215ENST00000555830 ITGB1P05556 798 aa17.33■□□□□ 0.36
SDR39U1-215ENST00000555830 PRKCBP05771 671 aa17.33■□□□□ 0.36
SDR39U1-215ENST00000555830 ITGA4P13612 1032 aa17.33■□□□□ 0.36
SDR39U1-215ENST00000555830 ATF7P17544 494 aaPredicted RBP17.33■□□□□ 0.36
SDR39U1-215ENST00000555830 CA8P35219 290 aa17.33■□□□□ 0.36
SDR39U1-215ENST00000555830 PPM1AP35813 382 aa17.33■□□□□ 0.36
SDR39U1-215ENST00000555830 RAD51AP2Q09MP3 1159 aa17.33■□□□□ 0.36
SDR39U1-215ENST00000555830 DHX8Q14562 1220 aaKnown RBP17.33■□□□□ 0.36
SDR39U1-215ENST00000555830 AAK1Q2M2I8 961 aa17.33■□□□□ 0.36
SDR39U1-215ENST00000555830 NOMO2Q5JPE7 1267 aa17.33■□□□□ 0.36
SDR39U1-215ENST00000555830 ZNF598Q86UK7 904 aaKnown RBP17.33■□□□□ 0.36
SDR39U1-215ENST00000555830 IFNLR1Q8IU57 520 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms