RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 MAFO75444 373 aaPredicted RBP27.19■■□□□ 1.94
FOXA1-204ENST00000554607 STBD1O95210 358 aa27.19■■□□□ 1.94
FOXA1-204ENST00000554607 GALTP07902 379 aa27.19■■□□□ 1.94
FOXA1-204ENST00000554607 WEE2P0C1S8 567 aa27.19■■□□□ 1.94
FOXA1-204ENST00000554607 CYP3A7P24462 503 aa27.19■■□□□ 1.94
FOXA1-204ENST00000554607 CABP7Q86V35 215 aa27.19■■□□□ 1.94
FOXA1-204ENST00000554607 TMEM173Q86WV6 379 aaPredicted RBP27.19■■□□□ 1.94
FOXA1-204ENST00000554607 RHPN2Q8IUC4 686 aa27.19■■□□□ 1.94
FOXA1-204ENST00000554607 TRIM22Q8IYM9 498 aa27.19■■□□□ 1.94
FOXA1-204ENST00000554607 SLC22A17Q8WUG5 538 aa27.19■■□□□ 1.94
FOXA1-204ENST00000554607 AUTS2Q8WXX7 1259 aa27.19■■□□□ 1.94
FOXA1-204ENST00000554607 LPPQ93052 612 aa27.19■■□□□ 1.94
FOXA1-204ENST00000554607 GJA10Q969M2 543 aa27.19■■□□□ 1.94
FOXA1-204ENST00000554607 LIMD1Q9UGP4 676 aa27.19■■□□□ 1.94
FOXA1-204ENST00000554607 PCDHA4Q9UN74 947 aa27.19■■□□□ 1.94
FOXA1-204ENST00000554607 ZFHX2Q9C0A1 2572 aaPredicted RBP27.18■■□□□ 1.94
FOXA1-204ENST00000554607 DDX11L8A8MPP1 907 aa27.18■■□□□ 1.94
FOXA1-204ENST00000554607 PROB1E7EW31 1015 aa27.18■■□□□ 1.94
FOXA1-204ENST00000554607 OFD1O75665 1012 aa27.18■■□□□ 1.94
FOXA1-204ENST00000554607 EPCAMP16422 314 aa27.18■■□□□ 1.94
FOXA1-204ENST00000554607 PSMA5P28066 241 aa27.18■■□□□ 1.94
FOXA1-204ENST00000554607 B3GNT9Q6UX72 402 aa27.18■■□□□ 1.94
FOXA1-204ENST00000554607 CATSPER4Q7RTX7 472 aa27.18■■□□□ 1.94
FOXA1-204ENST00000554607 INPP5FQ9Y2H2 1132 aa27.18■■□□□ 1.94
FOXA1-204ENST00000554607 PDIA3P30101 505 aaKnown RBP27.17■■□□□ 1.94
FOXA1-204ENST00000554607 EVCP57679 992 aa27.17■■□□□ 1.94
FOXA1-204ENST00000554607 LONRF3Q496Y0 759 aa27.17■■□□□ 1.94
FOXA1-204ENST00000554607 SKAP1Q86WV1 359 aa27.17■■□□□ 1.94
FOXA1-204ENST00000554607 URGCPQ8TCY9 931 aa27.17■■□□□ 1.94
FOXA1-204ENST00000554607 ACSF2Q96CM8 615 aaPredicted RBP27.17■■□□□ 1.94
FOXA1-204ENST00000554607 SNX27Q96L92 541 aa27.17■■□□□ 1.94
FOXA1-204ENST00000554607 MFSD1Q9H3U5 465 aa27.17■■□□□ 1.94
FOXA1-204ENST00000554607 CYP26B1Q9NR63 512 aa27.17■■□□□ 1.94
FOXA1-204ENST00000554607 TMEM150BA6NC51 233 aa27.16■■□□□ 1.94
FOXA1-204ENST00000554607 ASGR2P07307 311 aa27.16■■□□□ 1.94
FOXA1-204ENST00000554607 PSMC5P62195 406 aa27.16■■□□□ 1.94
FOXA1-204ENST00000554607 CCT2P78371 535 aaKnown RBP27.16■■□□□ 1.94
FOXA1-204ENST00000554607 ASTLQ6HA08 431 aaPredicted RBP27.16■■□□□ 1.94
FOXA1-204ENST00000554607 MOXD1Q6UVY6 613 aa27.16■■□□□ 1.94
FOXA1-204ENST00000554607 TMEM105Q8N8V8 129 aa27.16■■□□□ 1.94
FOXA1-204ENST00000554607 SH2D3AQ9BRG2 576 aa27.16■■□□□ 1.94
FOXA1-204ENST00000554607 EMILIN2Q9BXX0 1053 aa27.16■■□□□ 1.94
FOXA1-204ENST00000554607 SFXN1Q9H9B4 322 aa27.16■■□□□ 1.94
FOXA1-204ENST00000554607 TDP2O95551 362 aa27.15■■□□□ 1.94
FOXA1-204ENST00000554607 CLCN5P51795 746 aa27.15■■□□□ 1.94
FOXA1-204ENST00000554607 SSRP1Q08945 709 aaKnown RBP27.15■■□□□ 1.94
FOXA1-204ENST00000554607 KANK3Q6NY19 840 aa27.15■■□□□ 1.94
FOXA1-204ENST00000554607 TMC5Q6UXY8 1006 aa27.15■■□□□ 1.94
FOXA1-204ENST00000554607 EXOC8Q8IYI6 725 aa27.15■■□□□ 1.94
FOXA1-204ENST00000554607 FAM177A1Q8N128 213 aaPredicted RBP27.15■■□□□ 1.94
FOXA1-204ENST00000554607 NLRP4Q96MN2 994 aa27.15■■□□□ 1.94
FOXA1-204ENST00000554607 GBP3Q9H0R5 595 aa27.15■■□□□ 1.94
FOXA1-204ENST00000554607 SPDYE4A6NLX3 237 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 DKC1O60832 514 aaKnown RBP eCLIP27.14■■□□□ 1.94
FOXA1-204ENST00000554607 SLC11A1P49279 550 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 PTPN14Q15678 1187 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 GALNT17Q6IS24 598 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 ANO5Q75V66 913 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 OTOP3Q7RTS5 596 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 GPR149Q86SP6 731 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 BLIDQ8IZY5 108 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 ETNPPLQ8TBG4 499 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 BCL7CQ8WUZ0 217 aaPredicted RBP27.14■■□□□ 1.94
FOXA1-204ENST00000554607 MBOAT7Q96N66 472 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 SMOC2Q9H3U7 446 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 NCOA5Q9HCD5 579 aaKnown RBP27.14■■□□□ 1.94
FOXA1-204ENST00000554607 KANSL3Q9P2N6 904 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 DNAJB4Q9UDY4 337 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 PCDHB2Q9Y5E7 798 aa27.14■■□□□ 1.94
FOXA1-204ENST00000554607 MEIS3P2A8K0S8 358 aa27.13■■□□□ 1.93
FOXA1-204ENST00000554607 ALDH2P05091 517 aa27.13■■□□□ 1.93
FOXA1-204ENST00000554607 KSR1Q8IVT5 923 aa27.13■■□□□ 1.93
FOXA1-204ENST00000554607 FAM193BQ96PV7 902 aaPredicted RBP27.13■■□□□ 1.93
FOXA1-204ENST00000554607 AGPAT5Q9NUQ2 364 aa27.13■■□□□ 1.93
FOXA1-204ENST00000554607 PPME1Q9Y570 386 aa27.13■■□□□ 1.93
FOXA1-204ENST00000554607 DEXIO95424 95 aa27.12■■□□□ 1.93
FOXA1-204ENST00000554607 KLRC2P26717 231 aa27.12■■□□□ 1.93
FOXA1-204ENST00000554607 CCDC149Q6ZUS6 474 aa27.12■■□□□ 1.93
FOXA1-204ENST00000554607 MRPL10Q7Z7H8 261 aaKnown RBP27.12■■□□□ 1.93
FOXA1-204ENST00000554607 ZNF280BQ86YH2 543 aa27.12■■□□□ 1.93
FOXA1-204ENST00000554607 DAGLBQ8NCG7 672 aa27.12■■□□□ 1.93
FOXA1-204ENST00000554607 SLC7A3Q8WY07 619 aa27.12■■□□□ 1.93
FOXA1-204ENST00000554607 KLHL5Q96PQ7 755 aa27.12■■□□□ 1.93
FOXA1-204ENST00000554607 TMEM175Q9BSA9 504 aa27.12■■□□□ 1.93
FOXA1-204ENST00000554607 IFT122Q9HBG6 1241 aa27.12■■□□□ 1.93
FOXA1-204ENST00000554607 DDX25Q9UHL0 483 aaKnown RBP27.12■■□□□ 1.93
FOXA1-204ENST00000554607 COL4A3BPQ9Y5P4 624 aa27.12■■□□□ 1.93
FOXA1-204ENST00000554607 CFAP54Q96N23 3096 aa27.12■■□□□ 1.93
FOXA1-204ENST00000554607 CNTNAP2Q9UHC6 1331 aa27.12■■□□□ 1.93
FOXA1-204ENST00000554607 M0R2N6 131 aa27.11■■□□□ 1.93
FOXA1-204ENST00000554607 NBL1P41271 181 aa27.11■■□□□ 1.93
FOXA1-204ENST00000554607 QARSP47897 775 aaKnown RBP27.11■■□□□ 1.93
FOXA1-204ENST00000554607 NONOQ15233 471 aaKnown RBP eCLIP27.11■■□□□ 1.93
FOXA1-204ENST00000554607 SRGAP1Q7Z6B7 1085 aa27.11■■□□□ 1.93
FOXA1-204ENST00000554607 VN1R3Q9BXE9 311 aa27.11■■□□□ 1.93
FOXA1-204ENST00000554607 MRPL17Q9NRX2 175 aaKnown RBP27.11■■□□□ 1.93
FOXA1-204ENST00000554607 FAN1Q9Y2M0 1017 aa27.11■■□□□ 1.93
FOXA1-204ENST00000554607 PTPRZ1P23471 2315 aaPredicted RBP27.1■■□□□ 1.93
FOXA1-204ENST00000554607 CPLX1O14810 134 aa27.1■■□□□ 1.93
FOXA1-204ENST00000554607 CLCN4P51793 760 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms