RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 LRRC55Q6ZSA7 311 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 CATSPER3Q86XQ3 398 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 IFNLR1Q8IU57 520 aaPredicted RBP9.71□□□□□ -0.86
ACTN1-213ENST00000554508 THNSL1Q8IYQ7 743 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 RNF149Q8NC42 400 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 RNF169Q8NCN4 708 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.71□□□□□ -0.86
ACTN1-213ENST00000554508 PIGOQ8TEQ8 1089 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 PGBD4Q96DM1 585 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 RAB34Q9BZG1 259 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 XPNPEP1Q9NQW7 623 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 AGPAT5Q9NUQ2 364 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 FAM105AQ9NUU6 356 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 CLDND1Q9NY35 253 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 PUF60Q9UHX1 559 aaKnown RBP9.71□□□□□ -0.86
ACTN1-213ENST00000554508 DBR1Q9UK59 544 aaKnown RBP9.71□□□□□ -0.86
ACTN1-213ENST00000554508 FAM50BQ9Y247 325 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 TDRD15B5MCY1 1934 aaKnown RBP9.7□□□□□ -0.86
ACTN1-213ENST00000554508 FSD2A1L4K1 749 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 LAD1O00515 517 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 FGF18O76093 207 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 ATF7P17544 494 aaPredicted RBP9.7□□□□□ -0.86
ACTN1-213ENST00000554508 AXLP30530 894 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 PPM1AP35813 382 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 ARL2P36404 184 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 FXR2P51116 673 aaKnown RBP eCLIP9.7□□□□□ -0.86
ACTN1-213ENST00000554508 KRT17Q04695 432 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 HYAL1Q12794 435 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 ADAM15Q13444 863 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 HAUS3Q68CZ6 603 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 KCNT2Q6UVM3 1135 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 EP400NLQ6ZTU2 488 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 MRPL10Q7Z7H8 261 aaKnown RBP9.7□□□□□ -0.86
ACTN1-213ENST00000554508 C4orf32Q8N8J7 132 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 CNNM3Q8NE01 707 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 MCPH1Q8NEM0 835 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 HELQQ8TDG4 1101 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 MICAL1Q8TDZ2 1067 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 MRPS27Q92552 414 aaKnown RBP9.7□□□□□ -0.86
ACTN1-213ENST00000554508 ZNF558Q96NG5 402 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 NFKBIZQ9BYH8 718 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 MINDY3Q9H8M7 445 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 TLR9Q9NR96 1032 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 BMP2KQ9NSY1 1161 aaPredicted RBP9.7□□□□□ -0.86
ACTN1-213ENST00000554508 MYH11P35749 1972 aa9.7□□□□□ -0.86
ACTN1-213ENST00000554508 GRXCR2A6NFK2 248 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 H3BQV1 296 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 MED24O75448 989 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 ERLIN2O94905 339 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 CD2BP2O95400 341 aaKnown RBP9.69□□□□□ -0.86
ACTN1-213ENST00000554508 GJB2P29033 226 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 HOXA11P31270 313 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-213ENST00000554508 IRS1P35568 1242 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 LTBRP36941 435 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 ALDH7A1P49419 539 aaKnown RBP9.69□□□□□ -0.86
ACTN1-213ENST00000554508 TOB1P50616 345 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-213ENST00000554508 MUC3AQ02505 3323 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 PTGDRQ13258 359 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 RILPL1Q5EBL4 403 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 PTCRAQ6ISU1 281 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-213ENST00000554508 NOTUMQ6P988 496 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 GLB1LQ6UWU2 654 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 EFHBQ8N7U6 833 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 CCDC51Q96ER9 411 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 CDCA3Q99618 268 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-213ENST00000554508 IGFLR1Q9H665 355 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 UBN1Q9NPG3 1134 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 SPG21Q9NZD8 308 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 KANSL3Q9P2N6 904 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 HCSTQ9UBK5 93 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 LRWD1Q9UFC0 647 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 CNTNAP2Q9UHC6 1331 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-213ENST00000554508 PCDHB2Q9Y5E7 798 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 BDP1A6H8Y1 2624 aa9.69□□□□□ -0.86
ACTN1-213ENST00000554508 A0A087WWV3 80 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 H3BQ06 376 aaPredicted RBP9.68□□□□□ -0.86
ACTN1-213ENST00000554508 INO80B-WBP1J3KQ70 363 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 FSCN2O14926 492 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 USO1O60763 962 aaKnown RBP9.68□□□□□ -0.86
ACTN1-213ENST00000554508 OFD1O75665 1012 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 GLRA2P23416 452 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 CCT6AP40227 531 aaKnown RBP9.68□□□□□ -0.86
ACTN1-213ENST00000554508 PRPHP41219 470 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 NRIP1P48552 1158 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 BCAR1P56945 870 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 ERVFC1P60507 584 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 CAPSQ13938 189 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 BMS1Q14692 1282 aaKnown RBP9.68□□□□□ -0.86
ACTN1-213ENST00000554508 NOMO2Q5JPE7 1267 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 UBXN11Q5T124 520 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 MCTP1Q6DN14 999 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 FAM178BQ8IXR5 827 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 IGSF22Q8N9C0 903 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 URGCPQ8TCY9 931 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 ASAP3Q8TDY4 903 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 LPPQ93052 612 aa9.68□□□□□ -0.86
ACTN1-213ENST00000554508 NECAB3Q96P71 396 aaPredicted RBP9.68□□□□□ -0.86
ACTN1-213ENST00000554508 POLR3FQ9H1D9 316 aaPredicted RBP9.68□□□□□ -0.86
ACTN1-213ENST00000554508 TLE6Q9H808 572 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms