RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 ITPRIPQ8IWB1 547 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 DHX37Q8IY37 1157 aaKnown RBP8.04□□□□□ -1.12
ATXN3-224ENST00000554040 IFNL3Q8IZI9 196 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 RGS22Q8NE09 1264 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 PPTC7Q8NI37 304 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 COL26A1Q96A83 441 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 NSUN5Q96P11 429 aaKnown RBP8.04□□□□□ -1.12
ATXN3-224ENST00000554040 BCL11AQ9H165 835 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 IL17RBQ9NRM6 502 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 DDX41Q9UJV9 622 aaKnown RBP8.04□□□□□ -1.12
ATXN3-224ENST00000554040 STX8Q9UNK0 236 aa8.04□□□□□ -1.12
ATXN3-224ENST00000554040 COL4A6Q14031 1691 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 GPAA1O43292 621 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 RAB11FIP3O75154 756 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 CAND2O75155 1236 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 PPFIA4O75335 1185 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 CSPG5O95196 566 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 PSAPP07602 524 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 SLC3A2P08195 630 aaKnown RBP8.03□□□□□ -1.12
ATXN3-224ENST00000554040 ZNF286BP0CG31 522 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 DNAJB1P25685 340 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 NOVP48745 357 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 CCDC96Q2M329 555 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 NAALADL2Q58DX5 795 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 MCTP2Q6DN12 878 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 C16orf46Q6P387 395 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 FTSJ3Q8IY81 847 aaKnown RBP8.03□□□□□ -1.12
ATXN3-224ENST00000554040 SPPL3Q8TCT6 385 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 SUSD6Q92537 303 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 APPBP2Q92624 585 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 APBB2Q92870 758 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 P2RX5Q93086 422 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 OSBPL7Q9BZF2 842 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 MTMR7Q9Y216 660 aa8.03□□□□□ -1.12
ATXN3-224ENST00000554040 ZNF292O60281 2723 aa8.02□□□□□ -1.12
ATXN3-224ENST00000554040 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-224ENST00000554040 C17orf102A2RUQ5 167 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 TSPY2A6NKD2 308 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 NMT2O60551 498 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 EIF3JO75822 258 aaKnown RBP8.02□□□□□ -1.13
ATXN3-224ENST00000554040 GLP2RO95838 553 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 RLBP1P12271 317 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 NRIP1P48552 1158 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 SETDB1Q15047 1291 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 STXBP2Q15833 593 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 DGLUCYQ7Z3D6 616 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 ADGRD2Q7Z7M1 963 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 RBM23Q86U06 439 aaKnown RBP8.02□□□□□ -1.13
ATXN3-224ENST00000554040 TMEM105Q8N8V8 129 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 NSUN6Q8TEA1 469 aaKnown RBP8.02□□□□□ -1.13
ATXN3-224ENST00000554040 ATP6V0A1Q93050 837 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 ZNF689Q96CS4 500 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-224ENST00000554040 RMDN1Q96DB5 314 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 TAAR1Q96RJ0 339 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 IWS1Q96ST2 819 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 NACAP1Q9BZK3 213 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 MAF1Q9H063 256 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 RC3H2Q9HBD1 1191 aaKnown RBP8.02□□□□□ -1.13
ATXN3-224ENST00000554040 BARX2Q9UMQ3 279 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-224ENST00000554040 PLXNA3P51805 1871 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 ADGRA3Q8IWK6 1321 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 WDR19Q8NEZ3 1342 aa8.02□□□□□ -1.13
ATXN3-224ENST00000554040 ENPP3O14638 875 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 RNF113AO15541 343 aaKnown RBP8.01□□□□□ -1.13
ATXN3-224ENST00000554040 TREHO43280 583 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 ITGB1P05556 798 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 CTSHP09668 335 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 BRD2P25440 801 aaKnown RBP8.01□□□□□ -1.13
ATXN3-224ENST00000554040 HOXC8P31273 242 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 PPARAQ07869 468 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 LRP8Q14114 963 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 BTG3Q14201 252 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-224ENST00000554040 TMEM164Q5U3C3 297 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 UBALD2Q8IYN6 164 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 KBTBD3Q8NAB2 608 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 KREMEN2Q8NCW0 462 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 SYTL5Q8TDW5 730 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-224ENST00000554040 ATP8B4Q8TF62 1192 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 POF1BQ8WVV4 589 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 TBC1D5Q92609 795 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 C16orf70Q9BSU1 422 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 MKNK1Q9BUB5 465 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 RNPEPQ9H4A4 650 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 TRIM33Q9UPN9 1127 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 GTF3C3Q9Y5Q9 886 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 DMXL1Q9Y485 3027 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 LCTP09848 1927 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 MYH4Q9Y623 1939 aa8.01□□□□□ -1.13
ATXN3-224ENST00000554040 FRMPD2Q68DX3 1309 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-224ENST00000554040 KMT2EQ8IZD2 1858 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 CFAP47Q6ZTR5 3102 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 KRTAP9-6A0A140TA67 174 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 M0R2C6 588 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 TM4SF5O14894 197 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 DGKIO75912 1065 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 ALX3O95076 343 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 ATG7O95352 703 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 ZFYP08048 801 aaPredicted RBP8□□□□□ -1.13
ATXN3-224ENST00000554040 SMIM10L2AP0DMW4 78 aa8□□□□□ -1.13
ATXN3-224ENST00000554040 SMIM10L2BP0DMW5 78 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms