RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 IFNLR1Q8IU57 520 aaPredicted RBP14□□□□□ -0.17
CHGA-203ENST00000553866 HELQQ8TDG4 1101 aa14□□□□□ -0.17
CHGA-203ENST00000553866 LRRC15Q8TF66 581 aa14□□□□□ -0.17
CHGA-203ENST00000553866 CPB2Q96IY4 423 aa14□□□□□ -0.17
CHGA-203ENST00000553866 PLIN2Q99541 437 aa14□□□□□ -0.17
CHGA-203ENST00000553866 BHMT2Q9H2M3 363 aa14□□□□□ -0.17
CHGA-203ENST00000553866 CHST12Q9NRB3 414 aa14□□□□□ -0.17
CHGA-203ENST00000553866 TTLL13PA6NNM8 815 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 B4GALT5O43286 388 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 TSPAN1O60635 241 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 ITGB1P05556 798 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 RB1P06400 928 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 MUTP22033 750 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 PBX3P40426 434 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 AFF1P51825 1210 aaKnown RBP13.99□□□□□ -0.17
CHGA-203ENST00000553866 TFF2Q03403 129 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 POU5F1BQ06416 359 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 BRAPQ7Z569 592 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 KLHL23Q8NBE8 558 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 MRPL38Q96DV4 380 aaKnown RBP13.99□□□□□ -0.17
CHGA-203ENST00000553866 TRAIPQ9BWF2 469 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 TMEM117Q9H0C3 514 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 FAM105AQ9NUU6 356 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 DACT1Q9NYF0 836 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 LMCD1Q9NZU5 365 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 PLAGL2Q9UPG8 496 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 USP20Q9Y2K6 914 aa13.99□□□□□ -0.17
CHGA-203ENST00000553866 MYO7AQ13402 2215 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 VCANP13611 3396 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 INO80B-WBP1J3KQ70 363 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 EYA4O95677 639 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 EOMESO95936 686 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 EDN1P05305 212 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 PDCP20941 246 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 PTPAQ15257 358 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 SKIV2LQ15477 1246 aaKnown RBP13.98□□□□□ -0.17
CHGA-203ENST00000553866 ZRSR1Q15695 479 aaKnown RBP13.98□□□□□ -0.17
CHGA-203ENST00000553866 HYIQ5T013 277 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 KRT79Q5XKE5 535 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 ARL6IP4Q66PJ3 421 aaKnown RBP13.98□□□□□ -0.17
CHGA-203ENST00000553866 CDR2LQ86X02 465 aaPredicted RBP13.98□□□□□ -0.17
CHGA-203ENST00000553866 DAW1Q8N136 415 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 COLGALT1Q8NBJ5 622 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 MCPH1Q8NEM0 835 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 SPPL3Q8TCT6 385 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 KIFC3Q9BVG8 833 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 RUSC1Q9BVN2 902 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 EIF2AQ9BY44 585 aaKnown RBP13.98□□□□□ -0.17
CHGA-203ENST00000553866 RAB34Q9BZG1 259 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 PCDHB2Q9Y5E7 798 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 PCDHGC5Q9Y5F6 944 aa13.98□□□□□ -0.17
CHGA-203ENST00000553866 LRRIQ4A6NIV6 560 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 B4GALT3O60512 393 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 ARF4P18085 180 aaPredicted RBP13.97□□□□□ -0.17
CHGA-203ENST00000553866 IRS1P35568 1242 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 TFDP1Q14186 410 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 TCEAL5Q5H9L2 206 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 SPOUT1Q5T280 376 aaKnown RBP13.97□□□□□ -0.17
CHGA-203ENST00000553866 CDCA2Q69YH5 1023 aaPredicted RBP13.97□□□□□ -0.17
CHGA-203ENST00000553866 AGMOQ6ZNB7 445 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 USP49Q70CQ1 688 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 SPRYD3Q8NCJ5 442 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 SMG8Q8ND04 991 aaKnown RBP13.97□□□□□ -0.17
CHGA-203ENST00000553866 P2RX5Q93086 422 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 C11orf84Q9BUA3 381 aaPredicted RBP13.97□□□□□ -0.17
CHGA-203ENST00000553866 PLVAPQ9BX97 442 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 NFKBIZQ9BYH8 718 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 RNF39Q9H2S5 420 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 THEGQ9P2T0 379 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 DNM3Q9UQ16 869 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 RWDD3Q9Y3V2 267 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 HES2Q9Y543 173 aa13.97□□□□□ -0.17
CHGA-203ENST00000553866 STX6O43752 255 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 ZNF623O75123 536 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 OFD1O75665 1012 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 ERLIN2O94905 339 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 MARCKSP29966 332 aaPredicted RBP13.96□□□□□ -0.17
CHGA-203ENST00000553866 GTF2F1P35269 517 aaKnown RBP eCLIP13.96□□□□□ -0.17
CHGA-203ENST00000553866 CEBPZQ03701 1054 aaKnown RBP13.96□□□□□ -0.17
CHGA-203ENST00000553866 MAPK7Q13164 816 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 TMEM119Q4V9L6 283 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 SPECC1Q5M775 1068 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 RINT1Q6NUQ1 792 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 C1orf186Q6ZWK4 172 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 MRPL10Q7Z7H8 261 aaKnown RBP13.96□□□□□ -0.17
CHGA-203ENST00000553866 CABP7Q86V35 215 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 HSCBQ8IWL3 235 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 POF1BQ8WVV4 589 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 USP28Q96RU2 1077 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 RNF216Q9NWF9 866 aaPredicted RBP13.96□□□□□ -0.17
CHGA-203ENST00000553866 STK24Q9Y6E0 443 aa13.96□□□□□ -0.17
CHGA-203ENST00000553866 NPHP3-ACAD11A0A0J9YXS1 232 aa13.95□□□□□ -0.18
CHGA-203ENST00000553866 HOXA2O43364 376 aa13.95□□□□□ -0.18
CHGA-203ENST00000553866 HIP1RO75146 1068 aa13.95□□□□□ -0.18
CHGA-203ENST00000553866 PKP1Q13835 747 aa13.95□□□□□ -0.18
CHGA-203ENST00000553866 PTPROQ16827 1216 aa13.95□□□□□ -0.18
CHGA-203ENST00000553866 FOXD4L5Q5VV16 416 aaPredicted RBP13.95□□□□□ -0.18
CHGA-203ENST00000553866 ADGRD2Q7Z7M1 963 aa13.95□□□□□ -0.18
CHGA-203ENST00000553866 ABI1Q8IZP0 508 aa13.95□□□□□ -0.18
CHGA-203ENST00000553866 FOXD4L4Q8WXT5 416 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms