RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 DEFB123Q8N688 67 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 PLPP7Q8NBV4 271 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 RASSF8Q8NHQ8 419 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 TIFAQ96CG3 184 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 ZBTB10Q96DT7 871 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 CDK5RAP3Q96JB5 506 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 GCOM2Q9BZD3 368 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-209ENST00000553855 TMEM60Q9H2L4 133 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 ZSCAN16Q9H4T2 348 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-209ENST00000553855 PRDM9Q9NQV7 894 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 ANKEF1Q9NU02 776 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 CXXC1Q9P0U4 656 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-209ENST00000553855 SUCLA2Q9P2R7 463 aaPredicted RBP9.29□□□□□ -0.92
PSEN1-209ENST00000553855 LRFN2Q9ULH4 789 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 PCDHB6Q9Y5E3 794 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 PCDHA11Q9Y5I1 949 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 KDM3AQ9Y4C1 1321 aa9.29□□□□□ -0.92
PSEN1-209ENST00000553855 DENND3A2RUS2 1198 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 ARHGEF35A5YM69 484 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 SOX1O00570 391 aaPredicted RBP9.28□□□□□ -0.92
PSEN1-209ENST00000553855 ASAP2O43150 1006 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 STX6O43752 255 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 MAFO75444 373 aaPredicted RBP9.28□□□□□ -0.92
PSEN1-209ENST00000553855 SLITRK3O94933 977 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 LYPLA2O95372 231 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 VTNP04004 478 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 STAG3L1P0CL83 205 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 ZSCAN20P17040 1043 aaPredicted RBP9.28□□□□□ -0.92
PSEN1-209ENST00000553855 SYT1P21579 422 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 NLRP11P59045 1033 aaKnown RBP9.28□□□□□ -0.92
PSEN1-209ENST00000553855 COPS2P61201 443 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 SPIRE1Q08AE8 756 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 NCBP1Q09161 790 aaKnown RBP9.28□□□□□ -0.92
PSEN1-209ENST00000553855 MGAT3Q09327 533 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 LPIN1Q14693 890 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 TARBP2Q15633 366 aaKnown RBP9.28□□□□□ -0.92
PSEN1-209ENST00000553855 KIZQ2M2Z5 673 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 ARL6IP4Q66PJ3 421 aaKnown RBP9.28□□□□□ -0.92
PSEN1-209ENST00000553855 PLA2G4FQ68DD2 849 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 ANO5Q75V66 913 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 FERMT3Q86UX7 667 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 HERC6Q8IVU3 1022 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 SNX29Q8TEQ0 813 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 PSPC1Q8WXF1 523 aaKnown RBP9.28□□□□□ -0.92
PSEN1-209ENST00000553855 PPP1R16BQ96T49 567 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 MTRQ99707 1265 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 POLR3CQ9BUI4 534 aaPredicted RBP9.28□□□□□ -0.92
PSEN1-209ENST00000553855 ATP6V0A4Q9HBG4 840 aa9.28□□□□□ -0.92
PSEN1-209ENST00000553855 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.28□□□□□ -0.92
PSEN1-209ENST00000553855 GRXCR1A8MXD5 290 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 ZBTB42B2RXF5 422 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 WNT7AO00755 349 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 DGAT1O75907 488 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 UPP2O95045 317 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 SFPQP23246 707 aaKnown RBP eCLIP9.27□□□□□ -0.93
PSEN1-209ENST00000553855 RPA1P27694 616 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 CD52P31358 61 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 NPEPPSP55786 919 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 ATP2C1P98194 919 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-209ENST00000553855 TFDP1Q14186 410 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 MXD4Q14582 209 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-209ENST00000553855 MBTPS1Q14703 1052 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 EMC2Q15006 297 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 ZRSR1Q15695 479 aaKnown RBP9.27□□□□□ -0.93
PSEN1-209ENST00000553855 FAM117BQ6P1L5 589 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 ZNF410Q86VK4 478 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 RHPN2Q8IUC4 686 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 MCPH1Q8NEM0 835 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 ADAM32Q8TC27 787 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 CALML4Q96GE6 196 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 ZNF396Q96N95 335 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-209ENST00000553855 YME1L1Q96TA2 773 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 RAD9AQ99638 391 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 OSMRQ99650 979 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 HSD17B14Q9BPX1 270 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 SH2D3AQ9BRG2 576 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 ARHGAP9Q9BRR9 750 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 PBX4Q9BYU1 374 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 NT5C3AQ9H0P0 336 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 NKX2-4Q9H2Z4 354 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 IL21Q9HBE4 155 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 PADI3Q9ULW8 664 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 DNM3Q9UQ16 869 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 INSL6Q9Y581 213 aa9.27□□□□□ -0.93
PSEN1-209ENST00000553855 SZT2Q5T011 3432 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 KAT6AQ92794 2004 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 TMEM150BA6NC51 233 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 VWA3AA6NCI4 1184 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 USO1O60763 962 aaKnown RBP9.26□□□□□ -0.93
PSEN1-209ENST00000553855 IBSPP21815 317 aaPredicted RBP9.26□□□□□ -0.93
PSEN1-209ENST00000553855 EIF4BP23588 611 aaKnown RBP9.26□□□□□ -0.93
PSEN1-209ENST00000553855 TXLNAP40222 546 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 UBA7P41226 1012 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 TOB1P50616 345 aaPredicted RBP9.26□□□□□ -0.93
PSEN1-209ENST00000553855 GPC3P51654 580 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 RABGGTBP53611 331 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 GPNMBQ14956 572 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 MAP7D1Q3KQU3 841 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 CATSPER3Q86XQ3 398 aa9.26□□□□□ -0.93
PSEN1-209ENST00000553855 PIGOQ8TEQ8 1089 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms