RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 EMILIN2Q9BXX0 1053 aa19.03■□□□□ 0.64
CACNB3-222ENST00000552465 UNC45AQ9H3U1 944 aa19.03■□□□□ 0.64
CACNB3-222ENST00000552465 FAM105AQ9NUU6 356 aa19.03■□□□□ 0.64
CACNB3-222ENST00000552465 FBXL21Q9UKT6 434 aa19.03■□□□□ 0.64
CACNB3-222ENST00000552465 MYH9P35579 1960 aaKnown RBP19.02■□□□□ 0.64
CACNB3-222ENST00000552465 FAM186AA6NE01 2351 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 IGKV6-21A0A0C4DH24 114 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 CCDC196A0A1B0GTZ2 297 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 SPDYE4A6NLX3 237 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 GAS7O60861 476 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 DNM2P50570 870 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 LETM2Q2VYF4 491 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 MTERF2Q49AM1 385 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 ZNF280BQ86YH2 543 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 RASEFQ8IZ41 740 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 SLC5A5Q92911 643 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 CCDC136Q96JN2 1154 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 INO80BQ9C086 356 aaPredicted RBP19.02■□□□□ 0.64
CACNB3-222ENST00000552465 GBP3Q9H0R5 595 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 IGSF9Q9P2J2 1179 aa19.02■□□□□ 0.64
CACNB3-222ENST00000552465 NAP1L2Q9ULW6 460 aaPredicted RBP19.02■□□□□ 0.64
CACNB3-222ENST00000552465 PIN4Q9Y237 131 aaKnown RBP19.02■□□□□ 0.64
CACNB3-222ENST00000552465 PRPF3O43395 683 aaKnown RBP19.01■□□□□ 0.63
CACNB3-222ENST00000552465 B4GALT3O60512 393 aa19.01■□□□□ 0.63
CACNB3-222ENST00000552465 LILRB3O75022 631 aa19.01■□□□□ 0.63
CACNB3-222ENST00000552465 STBD1O95210 358 aa19.01■□□□□ 0.63
CACNB3-222ENST00000552465 CNPP09543 421 aaKnown RBP19.01■□□□□ 0.63
CACNB3-222ENST00000552465 RAB27AP51159 221 aa19.01■□□□□ 0.63
CACNB3-222ENST00000552465 XKR3Q5GH77 459 aa19.01■□□□□ 0.63
CACNB3-222ENST00000552465 C15orf39Q6ZRI6 1047 aa19.01■□□□□ 0.63
CACNB3-222ENST00000552465 ZNF410Q86VK4 478 aa19.01■□□□□ 0.63
CACNB3-222ENST00000552465 BICD2Q8TD16 824 aa19.01■□□□□ 0.63
CACNB3-222ENST00000552465 GJA10Q969M2 543 aa19.01■□□□□ 0.63
CACNB3-222ENST00000552465 TEKT3Q9BXF9 490 aa19.01■□□□□ 0.63
CACNB3-222ENST00000552465 SUCLA2Q9P2R7 463 aaPredicted RBP19.01■□□□□ 0.63
CACNB3-222ENST00000552465 STK39Q9UEW8 545 aa19.01■□□□□ 0.63
CACNB3-222ENST00000552465 SEPT9Q9UHD8 586 aaPredicted RBP19.01■□□□□ 0.63
CACNB3-222ENST00000552465 SPTBN4Q9H254 2564 aa19■□□□□ 0.63
CACNB3-222ENST00000552465 TMEM150BA6NC51 233 aa19■□□□□ 0.63
CACNB3-222ENST00000552465 SSBP05455 408 aaKnown RBP eCLIP19■□□□□ 0.63
CACNB3-222ENST00000552465 USP11P51784 963 aa19■□□□□ 0.63
CACNB3-222ENST00000552465 LRCH2Q5VUJ6 765 aa19■□□□□ 0.63
CACNB3-222ENST00000552465 RHPN2Q8IUC4 686 aa19■□□□□ 0.63
CACNB3-222ENST00000552465 RDM1Q8NG50 284 aa19■□□□□ 0.63
CACNB3-222ENST00000552465 PGBD4Q96DM1 585 aa19■□□□□ 0.63
CACNB3-222ENST00000552465 SH2D3AQ9BRG2 576 aa19■□□□□ 0.63
CACNB3-222ENST00000552465 WNT16Q9UBV4 365 aa19■□□□□ 0.63
CACNB3-222ENST00000552465 NARSO43776 548 aaKnown RBP18.99■□□□□ 0.63
CACNB3-222ENST00000552465 PSMD10O75832 226 aa18.99■□□□□ 0.63
CACNB3-222ENST00000552465 DDHD2O94830 711 aa18.99■□□□□ 0.63
CACNB3-222ENST00000552465 ALDH2P05091 517 aa18.99■□□□□ 0.63
CACNB3-222ENST00000552465 AGMOQ6ZNB7 445 aa18.99■□□□□ 0.63
CACNB3-222ENST00000552465 CATSPER4Q7RTX7 472 aa18.99■□□□□ 0.63
CACNB3-222ENST00000552465 MIER3Q7Z3K6 550 aa18.99■□□□□ 0.63
CACNB3-222ENST00000552465 CMASQ8NFW8 434 aaPredicted RBP18.99■□□□□ 0.63
CACNB3-222ENST00000552465 URGCPQ8TCY9 931 aa18.99■□□□□ 0.63
CACNB3-222ENST00000552465 YTHDC1Q96MU7 727 aaKnown RBP18.99■□□□□ 0.63
CACNB3-222ENST00000552465 MRPL17Q9NRX2 175 aaKnown RBP18.99■□□□□ 0.63
CACNB3-222ENST00000552465 PCDHB2Q9Y5E7 798 aa18.99■□□□□ 0.63
CACNB3-222ENST00000552465 N4BP1O75113 896 aaKnown RBP18.98■□□□□ 0.63
CACNB3-222ENST00000552465 MAFO75444 373 aaPredicted RBP18.98■□□□□ 0.63
CACNB3-222ENST00000552465 HMGB1P09429 215 aaKnown RBP18.98■□□□□ 0.63
CACNB3-222ENST00000552465 FGD1P98174 961 aa18.98■□□□□ 0.63
CACNB3-222ENST00000552465 KRT32Q14532 448 aa18.98■□□□□ 0.63
CACNB3-222ENST00000552465 MRPL10Q7Z7H8 261 aaKnown RBP18.98■□□□□ 0.63
CACNB3-222ENST00000552465 KSR1Q8IVT5 923 aa18.98■□□□□ 0.63
CACNB3-222ENST00000552465 KCNG4Q8TDN1 519 aa18.98■□□□□ 0.63
CACNB3-222ENST00000552465 RSAD2Q8WXG1 361 aa18.98■□□□□ 0.63
CACNB3-222ENST00000552465 TMEM175Q9BSA9 504 aa18.98■□□□□ 0.63
CACNB3-222ENST00000552465 SEMA4AQ9H3S1 761 aa18.98■□□□□ 0.63
CACNB3-222ENST00000552465 KANSL3Q9P2N6 904 aa18.98■□□□□ 0.63
CACNB3-222ENST00000552465 FAN1Q9Y2M0 1017 aa18.98■□□□□ 0.63
CACNB3-222ENST00000552465 KRBA1A5PL33 1030 aa18.97■□□□□ 0.63
CACNB3-222ENST00000552465 DDX11L8A8MPP1 907 aa18.97■□□□□ 0.63
CACNB3-222ENST00000552465 STK25O00506 426 aa18.97■□□□□ 0.63
CACNB3-222ENST00000552465 CFHP08603 1231 aa18.97■□□□□ 0.63
CACNB3-222ENST00000552465 AFF1P51825 1210 aaKnown RBP18.97■□□□□ 0.63
CACNB3-222ENST00000552465 AKAP17AQ02040 695 aaKnown RBP18.97■□□□□ 0.63
CACNB3-222ENST00000552465 B3GNT9Q6UX72 402 aa18.97■□□□□ 0.63
CACNB3-222ENST00000552465 CCDC148Q8NFR7 591 aa18.97■□□□□ 0.63
CACNB3-222ENST00000552465 PHKBQ93100 1093 aa18.97■□□□□ 0.63
CACNB3-222ENST00000552465 NLRP4Q96MN2 994 aa18.97■□□□□ 0.63
CACNB3-222ENST00000552465 FAM193BQ96PV7 902 aaPredicted RBP18.97■□□□□ 0.63
CACNB3-222ENST00000552465 IFT122Q9HBG6 1241 aa18.97■□□□□ 0.63
CACNB3-222ENST00000552465 WDR6Q9NNW5 1121 aaKnown RBP18.97■□□□□ 0.63
CACNB3-222ENST00000552465 MAN1C1Q9NR34 630 aa18.97■□□□□ 0.63
CACNB3-222ENST00000552465 MYO15AQ9UKN7 3530 aa18.97■□□□□ 0.63
CACNB3-222ENST00000552465 DENND4AQ7Z401 1863 aa18.97■□□□□ 0.63
CACNB3-222ENST00000552465 CCDC195A0A1B0GUA6 201 aa18.96■□□□□ 0.63
CACNB3-222ENST00000552465 NRP1O14786 923 aa18.96■□□□□ 0.63
CACNB3-222ENST00000552465 LMNAP02545 664 aaKnown RBP18.96■□□□□ 0.63
CACNB3-222ENST00000552465 GBP2P32456 591 aaPredicted RBP18.96■□□□□ 0.63
CACNB3-222ENST00000552465 NONOQ15233 471 aaKnown RBP eCLIP18.96■□□□□ 0.63
CACNB3-222ENST00000552465 Q4G0T1 1027 aa18.96■□□□□ 0.63
CACNB3-222ENST00000552465 CYP26C1Q6V0L0 522 aa18.96■□□□□ 0.63
CACNB3-222ENST00000552465 SLC44A3Q8N4M1 653 aa18.96■□□□□ 0.63
CACNB3-222ENST00000552465 RPS6KC1Q96S38 1066 aa18.96■□□□□ 0.63
CACNB3-222ENST00000552465 RHOBTB2Q9BYZ6 727 aa18.96■□□□□ 0.63
CACNB3-222ENST00000552465 RSAD1Q9HA92 442 aa18.96■□□□□ 0.63
CACNB3-222ENST00000552465 AGPAT5Q9NUQ2 364 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms