RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 TBC1D13Q9NVG8 400 aa20.09■□□□□ 0.81
PRPF40B-215ENST00000551418 VAV3Q9UKW4 847 aa20.09■□□□□ 0.81
PRPF40B-215ENST00000551418 CPLX1O14810 134 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 GALTP07902 379 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 EPCAMP16422 314 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 DNM2P50570 870 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 PSMC5P62195 406 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 NONOQ15233 471 aaKnown RBP eCLIP20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 LETM2Q2VYF4 491 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 RARS2Q5T160 578 aaKnown RBP20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 TMEM169Q96HH4 297 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 IGSF21Q96ID5 467 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 TRAIPQ9BWF2 469 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 MRPL9Q9BYD2 267 aaKnown RBP20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 C22orf23Q9BZE7 217 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 GBP3Q9H0R5 595 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 MINDY3Q9H8M7 445 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 BMP2KQ9NSY1 1161 aaPredicted RBP20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 FAM86C1Q9NVL1 165 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 CYP46A1Q9Y6A2 500 aa20.08■□□□□ 0.81
PRPF40B-215ENST00000551418 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 ZBTB39O15060 712 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 SFPQP23246 707 aaKnown RBP eCLIP20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 AVPR2P30518 371 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 SLC11A1P49279 550 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 TPRNQ4KMQ1 711 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 NOMO2Q5JPE7 1267 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 MOXD1Q6UVY6 613 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 AGMOQ6ZNB7 445 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 CATSPER4Q7RTX7 472 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 ZNF410Q86VK4 478 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 KREMEN2Q8NCW0 462 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 OXER1Q8TDS5 423 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 SLC22A17Q8WUG5 538 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 TMEM143Q96AN5 459 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 CYP26B1Q9NR63 512 aa20.07■□□□□ 0.8
PRPF40B-215ENST00000551418 ZNF623O75123 536 aa20.06■□□□□ 0.8
PRPF40B-215ENST00000551418 DDHD2O94830 711 aa20.06■□□□□ 0.8
PRPF40B-215ENST00000551418 BRD1O95696 1058 aa20.06■□□□□ 0.8
PRPF40B-215ENST00000551418 ASGR2P07307 311 aa20.06■□□□□ 0.8
PRPF40B-215ENST00000551418 CDC42EP1Q00587 391 aa20.06■□□□□ 0.8
PRPF40B-215ENST00000551418 EARS2Q5JPH6 523 aaKnown RBP20.06■□□□□ 0.8
PRPF40B-215ENST00000551418 ZBTB33Q86T24 672 aa20.06■□□□□ 0.8
PRPF40B-215ENST00000551418 DDX53Q86TM3 631 aaKnown RBP20.06■□□□□ 0.8
PRPF40B-215ENST00000551418 HAS1Q92839 578 aa20.06■□□□□ 0.8
PRPF40B-215ENST00000551418 PHF20Q9BVI0 1012 aa20.06■□□□□ 0.8
PRPF40B-215ENST00000551418 KCNMB3Q9NPA1 279 aa20.06■□□□□ 0.8
PRPF40B-215ENST00000551418 RGL1Q9NZL6 768 aa20.06■□□□□ 0.8
PRPF40B-215ENST00000551418 PCDHB2Q9Y5E7 798 aa20.06■□□□□ 0.8
PRPF40B-215ENST00000551418 FAM205CA6NFA0 338 aa20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 SRGAP2CP0DJJ0 459 aa20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 CTSAP10619 480 aa20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 HOXA11P31270 313 aaPredicted RBP20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 QARSP47897 775 aaKnown RBP20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 SCRN1Q12765 414 aa20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 PPP2R5CQ13362 524 aa20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 UBXN11Q5T124 520 aa20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 CES5AQ6NT32 575 aa20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 GLB1LQ6UWU2 654 aa20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 KRT25Q7Z3Z0 450 aa20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 PRPF31Q8WWY3 499 aaKnown RBP20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 TM6SF1Q9BZW5 370 aa20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 INO80BQ9C086 356 aaPredicted RBP20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 SLKQ9H2G2 1235 aaPredicted RBP20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 PDRG1Q9NUG6 133 aa20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 COL4A3BPQ9Y5P4 624 aa20.05■□□□□ 0.8
PRPF40B-215ENST00000551418 PTPN5P54829 565 aa20.04■□□□□ 0.8
PRPF40B-215ENST00000551418 RNASELQ05823 741 aaKnown RBP20.04■□□□□ 0.8
PRPF40B-215ENST00000551418 ITIH3Q06033 890 aa20.04■□□□□ 0.8
PRPF40B-215ENST00000551418 GALNT17Q6IS24 598 aa20.04■□□□□ 0.8
PRPF40B-215ENST00000551418 CEP170P1Q96L14 293 aa20.04■□□□□ 0.8
PRPF40B-215ENST00000551418 RIPOR3Q96MK2 946 aa20.04■□□□□ 0.8
PRPF40B-215ENST00000551418 DHX33Q9H6R0 707 aaKnown RBP20.04■□□□□ 0.8
PRPF40B-215ENST00000551418 AGPAT5Q9NUQ2 364 aa20.04■□□□□ 0.8
PRPF40B-215ENST00000551418 NR2E1Q9Y466 385 aa20.04■□□□□ 0.8
PRPF40B-215ENST00000551418 CACNA1HO95180 2353 aa20.03■□□□□ 0.8
PRPF40B-215ENST00000551418 SSBP05455 408 aaKnown RBP eCLIP20.03■□□□□ 0.8
PRPF40B-215ENST00000551418 SKIP12755 728 aa20.03■□□□□ 0.8
PRPF40B-215ENST00000551418 POLGP54098 1239 aaPredicted RBP20.03■□□□□ 0.8
PRPF40B-215ENST00000551418 LAMTOR4Q0VGL1 99 aa20.03■□□□□ 0.8
PRPF40B-215ENST00000551418 TMC5Q6UXY8 1006 aa20.03■□□□□ 0.8
PRPF40B-215ENST00000551418 MRPL10Q7Z7H8 261 aaKnown RBP20.03■□□□□ 0.8
PRPF40B-215ENST00000551418 LIMD1Q9UGP4 676 aa20.03■□□□□ 0.8
PRPF40B-215ENST00000551418 IRAK3Q9Y616 596 aa20.03■□□□□ 0.8
PRPF40B-215ENST00000551418 CCDC194A0A1B0GVG4 234 aa20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 CTDNEP1O95476 244 aa20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 NEFLP07196 543 aa20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 MTHFRP42898 656 aa20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 CTTNQ14247 550 aaKnown RBP20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 PTPN14Q15678 1187 aa20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 PIK3AP1Q6ZUJ8 805 aa20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 NEK8Q86SG6 692 aa20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 POTEDQ86YR6 584 aa20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 DYDC2Q96IM9 177 aa20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 FAM20AQ96MK3 541 aa20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 NECTIN4Q96NY8 510 aa20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 TPCN1Q9ULQ1 816 aa20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 C2orf16Q68DN1 1984 aa20.02■□□□□ 0.8
PRPF40B-215ENST00000551418 ARID2Q68CP9 1835 aa20.02■□□□□ 0.79
PRPF40B-215ENST00000551418 CCNT1O60563 726 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms