RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 DYMQ7RTS9 669 aa17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 MYOCDQ8IZQ8 938 aa17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 FSIP1Q8NA03 581 aa17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 PHOSPHO2Q8TCD6 241 aa17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 MRPS27Q92552 414 aaKnown RBP17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 LRCH3Q96II8 777 aa17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 SLC9A7Q96T83 725 aa17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 ADAM2Q99965 735 aa17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 NFKBIZQ9BYH8 718 aa17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 C2orf40Q9H1Z8 148 aa17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 ZHX3Q9H4I2 956 aa17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 C17orf75Q9HAS0 396 aa17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 ODF2LQ9ULJ1 636 aa17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 MICAL3Q7RTP6 2002 aa17.93■□□□□ 0.46
CHMP1A-209ENST00000550872 GRXCR1A8MXD5 290 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 MGEA5O60502 916 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 TBCAO75347 108 aaKnown RBP17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 ERLIN2O94905 339 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 PLS3P13797 630 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 NPTX2P47972 431 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 MBTD1Q05BQ5 628 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 FAM109BQ6ICB4 259 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 LINC01599Q8WXQ3 324 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 DDX12PQ92771 950 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 STAMQ92783 540 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 LRRC27Q9C0I9 530 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 TSPYL2Q9H2G4 693 aaPredicted RBP17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 KMT5AQ9NQR1 393 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 CHST12Q9NRB3 414 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 SERTAD1Q9UHV2 236 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 KCNG1Q9UIX4 513 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 HPSEQ9Y251 543 aa17.92■□□□□ 0.46
CHMP1A-209ENST00000550872 MYH11P35749 1972 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 FAM237AA0A1B0GTK4 181 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 LIG1P18858 919 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 IBSPP21815 317 aaPredicted RBP17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 SYKP43405 635 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 NDUFA8P51970 172 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 SMTNP53814 917 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 AMPD3Q01432 767 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 NCBP1Q09161 790 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 DSC3Q14574 896 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 PCBP1Q15365 356 aaKnown RBP eCLIP17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 CDCA2Q69YH5 1023 aaPredicted RBP17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 FAM117BQ6P1L5 589 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 TMCO2Q7Z6W1 182 aaPredicted RBP17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 CEP57L1Q8IYX8 460 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 MYCT1Q8N699 235 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 KIFC3Q9BVG8 833 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 TNMDQ9H2S6 317 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 MAGEF1Q9HAY2 307 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 PARVGQ9HBI0 331 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 RGS18Q9NS28 235 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 C1orf112Q9NSG2 853 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 KBTBD4Q9NVX7 518 aa17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 LARSQ9P2J5 1176 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 PIN4Q9Y237 131 aaKnown RBP17.91■□□□□ 0.46
CHMP1A-209ENST00000550872 SLC16A4O15374 487 aa17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 UPP2O95045 317 aa17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 EFNA5P52803 228 aa17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 MAPK6Q16659 721 aa17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 SLC24A5Q71RS6 500 aa17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 HERC6Q8IVU3 1022 aa17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 SPIRE2Q8WWL2 714 aa17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 NTPCRQ9BSD7 190 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 ZBED2Q9BTP6 218 aa17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 GOLPH3LQ9H4A5 285 aa17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 PRMT7Q9NVM4 692 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 DACT1Q9NYF0 836 aa17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 USP25Q9UHP3 1055 aa17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 ADGRA3Q8IWK6 1321 aa17.9■□□□□ 0.46
CHMP1A-209ENST00000550872 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 C9IYK1 514 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 K7ERI5 159 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 TSPAN1O60635 241 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 PRKCBP05771 671 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 SLFN14P0C7P3 912 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 IDEP14735 1019 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 AXLP30530 894 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 AFMP43652 599 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 ZNF131P52739 623 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 LONRF3Q496Y0 759 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 TWF2Q6IBS0 349 aaKnown RBP17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 TOP1MTQ969P6 601 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 DNAJC19Q96DA6 116 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 FZD8Q9H461 694 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 AGPAT5Q9NUQ2 364 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 TTC3P53804 2025 aa17.89■□□□□ 0.45
CHMP1A-209ENST00000550872 B4GALT5O43286 388 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 ACTN4O43707 911 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 TRAK2O60296 914 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 STAG3L1P0CL83 205 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 HOXA11P31270 313 aaPredicted RBP17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 SARSP49591 514 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 RABGGTBP53611 331 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 SMAD3P84022 425 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 AMHR2Q16671 573 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 FAM187BQ17R55 369 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 TMEM132AQ24JP5 1023 aa17.88■□□□□ 0.45
CHMP1A-209ENST00000550872 PPP4R3CPQ6ZMV5 832 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms