RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 TMEM173Q86WV6 379 aaPredicted RBP12.17□□□□□ -0.46
PFDN5-210ENST00000550513 MRPL43Q8N983 215 aaKnown RBP12.17□□□□□ -0.46
PFDN5-210ENST00000550513 PRSS33Q8NF86 280 aa12.17□□□□□ -0.46
PFDN5-210ENST00000550513 LPPQ93052 612 aa12.17□□□□□ -0.46
PFDN5-210ENST00000550513 NECTIN4Q96NY8 510 aa12.17□□□□□ -0.46
PFDN5-210ENST00000550513 PRRX2Q99811 253 aa12.17□□□□□ -0.46
PFDN5-210ENST00000550513 LARP6Q9BRS8 491 aaKnown RBP12.17□□□□□ -0.46
PFDN5-210ENST00000550513 ZBP1Q9H171 429 aa12.17□□□□□ -0.46
PFDN5-210ENST00000550513 TBC1D13Q9NVG8 400 aa12.17□□□□□ -0.46
PFDN5-210ENST00000550513 CDH22Q9UJ99 828 aa12.17□□□□□ -0.46
PFDN5-210ENST00000550513 INPP5FQ9Y2H2 1132 aa12.17□□□□□ -0.46
PFDN5-210ENST00000550513 USP34Q70CQ2 3546 aa12.17□□□□□ -0.46
PFDN5-210ENST00000550513 STK36Q9NRP7 1315 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 CCDC194A0A1B0GVG4 234 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 DKC1O60832 514 aaKnown RBP eCLIP12.16□□□□□ -0.46
PFDN5-210ENST00000550513 CLASP2O75122 1294 aaKnown RBP12.16□□□□□ -0.46
PFDN5-210ENST00000550513 CDKL5O76039 1030 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 POLGP54098 1239 aaPredicted RBP12.16□□□□□ -0.46
PFDN5-210ENST00000550513 RNASELQ05823 741 aaKnown RBP12.16□□□□□ -0.46
PFDN5-210ENST00000550513 PPP2R5CQ13362 524 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 NOMO2Q5JPE7 1267 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 NEK8Q86SG6 692 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 KSR1Q8IVT5 923 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 VPS52Q8N1B4 723 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 TMEM87AQ8NBN3 555 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 SLC7A3Q8WY07 619 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 ASIC4Q96FT7 647 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 SLKQ9H2G2 1235 aaPredicted RBP12.16□□□□□ -0.46
PFDN5-210ENST00000550513 POMKQ9H5K3 350 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 CYP26B1Q9NR63 512 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 AGPAT5Q9NUQ2 364 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 DZANK1Q9NVP4 752 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 VAV3Q9UKW4 847 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 KCNJ14Q9UNX9 436 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 COL4A3BPQ9Y5P4 624 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 ZDBF2Q9HCK1 2354 aa12.16□□□□□ -0.46
PFDN5-210ENST00000550513 MEIS3P2A8K0S8 358 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 EML1O00423 815 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 CTSAP10619 480 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 GCFC2P16383 781 aaKnown RBP12.15□□□□□ -0.46
PFDN5-210ENST00000550513 XBP1P17861 261 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 MTHFRP42898 656 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 QARSP47897 775 aaKnown RBP12.15□□□□□ -0.46
PFDN5-210ENST00000550513 MTMR3Q13615 1198 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 GIT2Q14161 759 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 RARS2Q5T160 578 aaKnown RBP12.15□□□□□ -0.46
PFDN5-210ENST00000550513 IER5LQ5T953 404 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 URGCPQ8TCY9 931 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 AUTS2Q8WXX7 1259 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 PGBD4Q96DM1 585 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 IGSF21Q96ID5 467 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 RIPOR3Q96MK2 946 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 LXNQ9BS40 222 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 PHF20Q9BVI0 1012 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 GBP3Q9H0R5 595 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 ADAM7Q9H2U9 754 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 NRDE2Q9H7Z3 1164 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 IFT122Q9HBG6 1241 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 KCNMB3Q9NPA1 279 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 BMP2KQ9NSY1 1161 aaPredicted RBP12.15□□□□□ -0.46
PFDN5-210ENST00000550513 TRIP11Q15643 1979 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 DOCK8Q8NF50 2099 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 MYH15Q9Y2K3 1946 aa12.15□□□□□ -0.46
PFDN5-210ENST00000550513 C2CD4DB7Z1M9 353 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 CCNT1O60563 726 aaKnown RBP12.14□□□□□ -0.47
PFDN5-210ENST00000550513 CXCL14O95715 111 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 P4HBP07237 508 aaKnown RBP12.14□□□□□ -0.47
PFDN5-210ENST00000550513 EPCAMP16422 314 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 RFC5P40937 340 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 VCPP55072 806 aaKnown RBP12.14□□□□□ -0.47
PFDN5-210ENST00000550513 NPEPPSP55786 919 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 SCRN1Q12765 414 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 PPP4R3AQ6IN85 833 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 KIAA1841Q6NSI8 718 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 DDX53Q86TM3 631 aaKnown RBP12.14□□□□□ -0.47
PFDN5-210ENST00000550513 EXOC8Q8IYI6 725 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 TDRD5Q8NAT2 981 aaKnown RBP12.14□□□□□ -0.47
PFDN5-210ENST00000550513 BCL7CQ8WUZ0 217 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-210ENST00000550513 PSPC1Q8WXF1 523 aaKnown RBP12.14□□□□□ -0.47
PFDN5-210ENST00000550513 CEP170P1Q96L14 293 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 FAM20AQ96MK3 541 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 NAP1L4Q99733 375 aaKnown RBP12.14□□□□□ -0.47
PFDN5-210ENST00000550513 DHX33Q9H6R0 707 aaKnown RBP12.14□□□□□ -0.47
PFDN5-210ENST00000550513 PDRG1Q9NUG6 133 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 WRAP73Q9P2S5 460 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-210ENST00000550513 DNAJB4Q9UDY4 337 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 SORCS3Q9UPU3 1222 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 PPME1Q9Y570 386 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 PCDHB2Q9Y5E7 798 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 IRAK3Q9Y616 596 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 MYO15AQ9UKN7 3530 aa12.14□□□□□ -0.47
PFDN5-210ENST00000550513 MIA3Q5JRA6 1907 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 SPDYE4A6NLX3 237 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 TBX3O15119 743 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 GAS2O43903 313 aaKnown RBP12.13□□□□□ -0.47
PFDN5-210ENST00000550513 MARCH6O60337 910 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 ZNF623O75123 536 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 OFD1O75665 1012 aa12.13□□□□□ -0.47
PFDN5-210ENST00000550513 GALTP07902 379 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms