RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 SSBP05455 408 aaKnown RBP eCLIP16.94■□□□□ 0.3
SVOP-203ENST00000550436 MYBP10242 640 aa16.94■□□□□ 0.3
SVOP-203ENST00000550436 DDX53Q86TM3 631 aaKnown RBP16.94■□□□□ 0.3
SVOP-203ENST00000550436 LARP6Q9BRS8 491 aaKnown RBP16.94■□□□□ 0.3
SVOP-203ENST00000550436 MRPL9Q9BYD2 267 aaKnown RBP16.94■□□□□ 0.3
SVOP-203ENST00000550436 OFD1O75665 1012 aa16.93■□□□□ 0.3
SVOP-203ENST00000550436 PTPN14Q15678 1187 aa16.93■□□□□ 0.3
SVOP-203ENST00000550436 TWF2Q6IBS0 349 aaKnown RBP16.93■□□□□ 0.3
SVOP-203ENST00000550436 TMEM87AQ8NBN3 555 aa16.93■□□□□ 0.3
SVOP-203ENST00000550436 SLC5A5Q92911 643 aa16.93■□□□□ 0.3
SVOP-203ENST00000550436 KLHL5Q96PQ7 755 aa16.93■□□□□ 0.3
SVOP-203ENST00000550436 GCOM2Q9BZD3 368 aaPredicted RBP16.93■□□□□ 0.3
SVOP-203ENST00000550436 CYP26B1Q9NR63 512 aa16.93■□□□□ 0.3
SVOP-203ENST00000550436 DZANK1Q9NVP4 752 aa16.93■□□□□ 0.3
SVOP-203ENST00000550436 DACT1Q9NYF0 836 aa16.93■□□□□ 0.3
SVOP-203ENST00000550436 VPS54Q9P1Q0 977 aa16.93■□□□□ 0.3
SVOP-203ENST00000550436 SEPT9Q9UHD8 586 aaPredicted RBP16.93■□□□□ 0.3
SVOP-203ENST00000550436 PIN4Q9Y237 131 aaKnown RBP16.93■□□□□ 0.3
SVOP-203ENST00000550436 IRAK3Q9Y616 596 aa16.93■□□□□ 0.3
SVOP-203ENST00000550436 NID2Q14112 1375 aa16.92■□□□□ 0.3
SVOP-203ENST00000550436 PRPF3O43395 683 aaKnown RBP16.92■□□□□ 0.3
SVOP-203ENST00000550436 NARSO43776 548 aaKnown RBP16.92■□□□□ 0.3
SVOP-203ENST00000550436 GAS7O60861 476 aa16.92■□□□□ 0.3
SVOP-203ENST00000550436 DDHD2O94830 711 aa16.92■□□□□ 0.3
SVOP-203ENST00000550436 PDIA3P30101 505 aaKnown RBP16.92■□□□□ 0.3
SVOP-203ENST00000550436 CLCN5P51795 746 aa16.92■□□□□ 0.3
SVOP-203ENST00000550436 CCT2P78371 535 aaKnown RBP16.92■□□□□ 0.3
SVOP-203ENST00000550436 NOMO2Q5JPE7 1267 aa16.92■□□□□ 0.3
SVOP-203ENST00000550436 GPR149Q86SP6 731 aa16.92■□□□□ 0.3
SVOP-203ENST00000550436 CABP7Q86V35 215 aa16.92■□□□□ 0.3
SVOP-203ENST00000550436 ADSSL1Q8N142 457 aa16.92■□□□□ 0.3
SVOP-203ENST00000550436 NKD2Q969F2 451 aaPredicted RBP16.92■□□□□ 0.3
SVOP-203ENST00000550436 NCOA5Q9HCD5 579 aaKnown RBP16.92■□□□□ 0.3
SVOP-203ENST00000550436 PDRG1Q9NUG6 133 aa16.92■□□□□ 0.3
SVOP-203ENST00000550436 USTQ9Y2C2 406 aa16.92■□□□□ 0.3
SVOP-203ENST00000550436 DOCK6Q96HP0 2047 aa16.92■□□□□ 0.3
SVOP-203ENST00000550436 DOCK8Q8NF50 2099 aa16.92■□□□□ 0.3
SVOP-203ENST00000550436 IGKV6-21A0A0C4DH24 114 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 CCDC196A0A1B0GTZ2 297 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 N4BP1O75113 896 aaKnown RBP16.91■□□□□ 0.3
SVOP-203ENST00000550436 CNPP09543 421 aaKnown RBP16.91■□□□□ 0.3
SVOP-203ENST00000550436 POLGP54098 1239 aaPredicted RBP16.91■□□□□ 0.3
SVOP-203ENST00000550436 EVCP57679 992 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 NTRK3Q16288 839 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 LRCH2Q5VUJ6 765 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 AGMOQ6ZNB7 445 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 RHPN2Q8IUC4 686 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 PLCD3Q8N3E9 789 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 RSAD2Q8WXG1 361 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 TEKT3Q9BXF9 490 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 NIFKQ9BYG3 293 aaKnown RBP16.91■□□□□ 0.3
SVOP-203ENST00000550436 KCNK12Q9HB15 430 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 CHST12Q9NRB3 414 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 FAM105AQ9NUU6 356 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 SUCLA2Q9P2R7 463 aaPredicted RBP16.91■□□□□ 0.3
SVOP-203ENST00000550436 ZNF292O60281 2723 aa16.91■□□□□ 0.3
SVOP-203ENST00000550436 LILRB3O75022 631 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 PSMD10O75832 226 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 TDP2O95551 362 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 AOC1P19801 751 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 KLRC2P26717 231 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 CLCN4P51793 760 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 ANAPC15P60006 121 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 RNASELQ05823 741 aaKnown RBP16.9■□□□□ 0.3
SVOP-203ENST00000550436 BMS1Q14692 1282 aaKnown RBP16.9■□□□□ 0.3
SVOP-203ENST00000550436 C8orf34Q49A92 452 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 PLA2G4FQ68DD2 849 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 MCTP2Q6DN12 878 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 GLB1LQ6UWU2 654 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 TAS1R1Q7RTX1 841 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 MIER3Q7Z3K6 550 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 ZNF579Q8NAF0 562 aaKnown RBP16.9■□□□□ 0.3
SVOP-203ENST00000550436 NLRP4Q96MN2 994 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 RIT2Q99578 217 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 CACNA1AO00555 2505 aa16.9■□□□□ 0.3
SVOP-203ENST00000550436 DDX11L8A8MPP1 907 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 C2CD2LO14523 706 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 GNA11P29992 359 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 JAK3P52333 1124 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 TDGQ13569 410 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 XKR3Q5GH77 459 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 B3GNT9Q6UX72 402 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 CCDC149Q6ZUS6 474 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 CATSPER4Q7RTX7 472 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 CCDC105Q8IYK2 499 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 SIX5Q8N196 739 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 ZNF710Q8N1W2 664 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 ST13P5Q8NFI4 369 aaPredicted RBP16.89■□□□□ 0.29
SVOP-203ENST00000550436 TRAIPQ9BWF2 469 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 SLC26A6Q9BXS9 759 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 MINDY3Q9H8M7 445 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 SFXN1Q9H9B4 322 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 PCDHB2Q9Y5E7 798 aa16.89■□□□□ 0.29
SVOP-203ENST00000550436 DCHS1Q96JQ0 3298 aa16.88■□□□□ 0.29
SVOP-203ENST00000550436 SPDYE4A6NLX3 237 aa16.88■□□□□ 0.29
SVOP-203ENST00000550436 ZNF623O75123 536 aa16.88■□□□□ 0.29
SVOP-203ENST00000550436 CFHP08603 1231 aa16.88■□□□□ 0.29
SVOP-203ENST00000550436 SFPQP23246 707 aaKnown RBP eCLIP16.88■□□□□ 0.29
SVOP-203ENST00000550436 SFNP31947 248 aa16.88■□□□□ 0.29
SVOP-203ENST00000550436 NPEPPSP55786 919 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms