RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 NARFQ9UHQ1 456 aa10.96□□□□□ -0.66
SMARCC2-209ENST00000550164 ABCB11O95342 1321 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 GOLGA8SH3BPF8 625 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 GOLGA8MH3BSY2 632 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 INHBAP08476 426 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 CYP11B2P19099 503 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 VAMP7P51809 220 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 MIIPQ5JXC2 388 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 BARGINQ6ZT62 677 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 TXNRD3Q86VQ6 643 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 PASD1Q8IV76 773 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 DEPTORQ8TB45 409 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 KMT5AQ9NQR1 393 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 SIK3Q9Y2K2 1263 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 TMEM120BA0PK00 339 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 CLDN3O15551 220 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 CYP26A1O43174 497 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 PHF2O75151 1096 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 BBOX1O75936 387 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 PON1P27169 355 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 CASP4P49662 377 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 STAT2P52630 851 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 GNPTABQ3T906 1256 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 TRIM4Q9C037 500 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 PABPC3Q9H361 631 aaKnown RBP10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 ARL2BPQ9Y2Y0 163 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 LRRIQ4A6NIV6 560 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 CYTH3O43739 400 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 KIF1CO43896 1103 aaKnown RBP10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 GH2P01242 217 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 RAD23BP54727 409 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 ITPK1Q13572 414 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 KYNUQ16719 465 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 BRDTQ58F21 947 aaPredicted RBP10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 PADI6Q6TGC4 694 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 SLC30A5Q8TAD4 765 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 EPS8L3Q8TE67 593 aaKnown RBP10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 NSMCE1Q8WV22 266 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 YY1AP1Q9H869 796 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 JMJD4Q9H9V9 463 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 APEX2Q9UBZ4 518 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 RIC1Q4ADV7 1423 aa10.95□□□□□ -0.66
SMARCC2-209ENST00000550164 RSPH10B2B2RC85 870 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 F5H6K3 240 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 DKC1O60832 514 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 MT-ND3P03897 115 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 RSPH10BP0C881 870 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 COMTP21964 271 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 BASP1P80723 227 aaKnown RBP10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 KLRC3Q07444 240 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 ZNF844Q08AG5 666 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 PPP2R5DQ14738 602 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 TRADDQ15628 312 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 THAP2Q9H0W7 228 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 WNT8AQ9H1J5 351 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 VCX3BQ9H321 246 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 CLRN2A0PK11 232 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 IGF2BP3O00425 579 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 DCTN3O75935 186 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 ESRRAP11474 423 aaPredicted RBP10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 NFIXQ14938 502 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 SCYL2Q6P3W7 929 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 C16orf86Q6ZW13 317 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 APTXQ7Z2E3 356 aaKnown RBP10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 SCFD1Q8WVM8 642 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 TRIM11Q96F44 468 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 PNMA5Q96PV4 448 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 NUDCD1Q96RS6 583 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 C11orf70Q9BRQ4 267 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 BLOC1S4Q9NUP1 217 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 SCOCQ9UIL1 159 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 SLC16A4O15374 487 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 STAM2O75886 525 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 EYA4O95677 639 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 TMEM253P0C7T8 217 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 SKIP12755 728 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 ERFP50548 548 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 HADHQ16836 314 aaKnown RBP10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 KCNK18Q7Z418 384 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 PYROXD1Q8WU10 500 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 C18orf8Q96DM3 657 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 TSC22D3Q99576 134 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 FAM118BQ9BPY3 351 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 MRPL47Q9HD33 250 aaKnown RBP10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 GDF3Q9NR23 364 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 MAD1L1Q9Y6D9 718 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 RPS6KA4O75676 772 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 PLCB4Q15147 1175 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 ARHGEF16Q5VV41 709 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 CATSPER3Q86XQ3 398 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 ACTRT1Q8TDG2 376 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 CNKSR2Q8WXI2 1034 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 CEP170P1Q96L14 293 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 CARD9Q9H257 536 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 ADAM22Q9P0K1 906 aa10.94□□□□□ -0.66
SMARCC2-209ENST00000550164 PFASO15067 1338 aa10.93□□□□□ -0.66
SMARCC2-209ENST00000550164 ESYT2A0FGR8 921 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms