RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 KIF3CO14782 793 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 TBCAO75347 108 aaKnown RBP11.14□□□□□ -0.63
ERBB3-214ENST00000550070 IFFO1Q0D2I5 559 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 NFIAQ12857 509 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 ZNF211Q13398 564 aaPredicted RBP11.14□□□□□ -0.63
ERBB3-214ENST00000550070 ANKRD20A8PQ5CZ79 823 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 DUPD1Q68J44 220 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 RINT1Q6NUQ1 792 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 SLC30A10Q6XR72 485 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 FAM186BQ8IYM0 893 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 PIGOQ8TEQ8 1089 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 SNRNP27Q8WVK2 155 aaKnown RBP11.14□□□□□ -0.63
ERBB3-214ENST00000550070 CCDC114Q96M63 670 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 EIF2AK1Q9BQI3 630 aaKnown RBP11.14□□□□□ -0.63
ERBB3-214ENST00000550070 STK33Q9BYT3 514 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 LRRC4BQ9NT99 713 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 TAS2R14Q9NYV8 317 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 VAV3Q9UKW4 847 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 RABGAP1Q9Y3P9 1069 aa11.14□□□□□ -0.63
ERBB3-214ENST00000550070 BBOX1O75936 387 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 EYA4O95677 639 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 LMNB1P20700 586 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 DRD4P21917 467 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 PSMC2P35998 433 aaKnown RBP11.13□□□□□ -0.63
ERBB3-214ENST00000550070 FMO5P49326 533 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 DR1Q01658 176 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 USH1GQ495M9 461 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 CBWD6Q4V339 395 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 CBWD3Q5JTY5 395 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 CBWD5Q5RIA9 395 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 SLFN13Q68D06 897 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 AADACL2Q6P093 401 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 PALB2Q86YC2 1186 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 CACNA2D3Q8IZS8 1091 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 ZKSCAN4Q969J2 545 aaPredicted RBP11.13□□□□□ -0.63
ERBB3-214ENST00000550070 ERP44Q9BS26 406 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 RAB17Q9H0T7 212 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 THAP2Q9H0W7 228 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 ACTR5Q9H9F9 607 aaPredicted RBP11.13□□□□□ -0.63
ERBB3-214ENST00000550070 OLFML3Q9NRN5 406 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 SPDYE3A6NKU9 549 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 ZBTB39O15060 712 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 HLA-DOAP06340 250 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 SREBF1P36956 1147 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 FBXO41Q8TF61 875 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 CTNNBL1Q8WYA6 563 aaPredicted RBP11.13□□□□□ -0.63
ERBB3-214ENST00000550070 ALG3Q92685 438 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 FAM20AQ96MK3 541 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 A1CFQ9NQ94 594 aaKnown RBP11.13□□□□□ -0.63
ERBB3-214ENST00000550070 COG5Q9UP83 839 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 DAAM1Q9Y4D1 1078 aa11.13□□□□□ -0.63
ERBB3-214ENST00000550070 SERPINB2P05120 415 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 EIF3BP55884 814 aaKnown RBP11.12□□□□□ -0.63
ERBB3-214ENST00000550070 KLRC3Q07444 240 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 CTTNQ14247 550 aaKnown RBP11.12□□□□□ -0.63
ERBB3-214ENST00000550070 ERMARDQ5T6L9 678 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 CPLX4Q7Z7G2 160 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 SIAH1Q8IUQ4 282 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 MYCT1Q8N699 235 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 RNF25Q96BH1 459 aaPredicted RBP11.12□□□□□ -0.63
ERBB3-214ENST00000550070 XPO6Q96QU8 1125 aaKnown RBP11.12□□□□□ -0.63
ERBB3-214ENST00000550070 POLR3CQ9BUI4 534 aaPredicted RBP11.12□□□□□ -0.63
ERBB3-214ENST00000550070 CARD9Q9H257 536 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 GOPCQ9HD26 462 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 DIS3Q9Y2L1 958 aaKnown RBP11.12□□□□□ -0.63
ERBB3-214ENST00000550070 CHUKO15111 745 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 ATP2C2O75185 946 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 HOXA13P31271 388 aaPredicted RBP11.12□□□□□ -0.63
ERBB3-214ENST00000550070 SCTRP47872 440 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 SPDYCQ5MJ68 293 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 UBAP2Q5T6F2 1119 aaKnown RBP11.12□□□□□ -0.63
ERBB3-214ENST00000550070 GKAP1Q5VSY0 366 aaPredicted RBP11.12□□□□□ -0.63
ERBB3-214ENST00000550070 APOBEC3HQ6NTF7 200 aaKnown RBP11.12□□□□□ -0.63
ERBB3-214ENST00000550070 ZDHHC24Q6UX98 284 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 FUKQ8N0W3 1084 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 AMNQ9BXJ7 453 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 HAUS2Q9NVX0 235 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 WDR70Q9NW82 654 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 TMOD4Q9NZQ9 345 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 SNX24Q9Y343 169 aa11.12□□□□□ -0.63
ERBB3-214ENST00000550070 KIAA0391O15091 583 aaKnown RBP11.11□□□□□ -0.63
ERBB3-214ENST00000550070 EIF3DO15371 548 aaKnown RBP eCLIP11.11□□□□□ -0.63
ERBB3-214ENST00000550070 FAM13AO94988 1023 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 TRIM49P0CI25 452 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 TRIM49CP0CI26 452 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 VCAM1P19320 739 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 TNFAIP3P21580 790 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 CIITAP33076 1130 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 PMS2P54278 862 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 PLTPP55058 493 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 ARHGAP44Q17R89 818 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 C11orf91Q3C1V1 193 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 LACTB2Q53H82 288 aaPredicted RBP11.11□□□□□ -0.63
ERBB3-214ENST00000550070 KIAA1755Q5JYT7 1200 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 ARMC9Q7Z3E5 817 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 KRT27Q7Z3Y8 459 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 JAMLQ86YT9 394 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 FBXO25Q8TCJ0 367 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 CCT6BQ92526 530 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms