RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 CHRNA2Q15822 529 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 STEAP3Q658P3 488 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.47□□□□□ -1.53
SNRPF-202ENST00000549580 PGM2L1Q6PCE3 622 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 KCTD1Q719H9 257 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 CMIPQ8IY22 773 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 CMTR2Q8IYT2 770 aaKnown RBP5.47□□□□□ -1.53
SNRPF-202ENST00000549580 GIMAP8Q8ND71 665 aaPredicted RBP5.47□□□□□ -1.53
SNRPF-202ENST00000549580 C16orf92Q96LL3 132 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 CRAMP1Q96RY5 1269 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 LMF1Q96S06 567 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 MS4A5Q9H3V2 200 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 SMOC1Q9H4F8 434 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 ARNT2Q9HBZ2 717 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 KCNH7Q9NS40 1196 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 GOLGA6AQ9NYA3 693 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 PTPN22Q9Y2R2 807 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 GIT1Q9Y2X7 761 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 TELO2Q9Y4R8 837 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 NUB1Q9Y5A7 615 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 PCDHB4Q9Y5E5 795 aa5.47□□□□□ -1.53
SNRPF-202ENST00000549580 FAM90A27PA6NNH2 459 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 GOLGA8AA7E2F4 631 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 GOLGA8BA8MQT2 603 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 HGSO14964 777 aaPredicted RBP5.46□□□□□ -1.54
SNRPF-202ENST00000549580 MAFKO60675 156 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 PPFIA2O75334 1257 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 C4BPAP04003 597 aaKnown RBP5.46□□□□□ -1.54
SNRPF-202ENST00000549580 CD40P25942 277 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 SDHAP31040 664 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 GJA4P35212 333 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 SCAND1P57086 179 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 PTH1RQ03431 593 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 UBE4AQ14139 1066 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 ODF1Q14990 250 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 GFOD2Q3B7J2 385 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 LSM12Q3MHD2 195 aaKnown RBP5.46□□□□□ -1.54
SNRPF-202ENST00000549580 HS1BP3Q53T59 392 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 AGBL4Q5VU57 503 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 PCSK4Q6UW60 755 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 EP400NLQ6ZTU2 488 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 TAX1BP1Q86VP1 789 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 PROSER1Q86XN7 944 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 LDLRAD3Q86YD5 345 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 TPH2Q8IWU9 490 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 PHOSPHO1Q8TCT1 267 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 NEU4Q8WWR8 484 aaPredicted RBP5.46□□□□□ -1.54
SNRPF-202ENST00000549580 NUP88Q99567 741 aaPredicted RBP5.46□□□□□ -1.54
SNRPF-202ENST00000549580 MKS1Q9NXB0 559 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 ASH2LQ9UBL3 628 aa5.46□□□□□ -1.54
SNRPF-202ENST00000549580 KLHL33A6NCF5 533 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 SLC27A2O14975 620 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 KDM1AO60341 852 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 H2AFYO75367 372 aaKnown RBP5.45□□□□□ -1.54
SNRPF-202ENST00000549580 PEX14O75381 377 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 LTFP02788 710 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 KRT18P05783 430 aaKnown RBP5.45□□□□□ -1.54
SNRPF-202ENST00000549580 C1SP09871 688 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 PF4V1P10720 104 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 FNTBP49356 437 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 RHBDL3P58872 404 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 TUSC3Q13454 348 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 TCIRG1Q13488 830 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 CATSPEREQ5SY80 951 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.45□□□□□ -1.54
SNRPF-202ENST00000549580 RALYLQ86SE5 291 aaKnown RBP5.45□□□□□ -1.54
SNRPF-202ENST00000549580 PNMA8AQ86V59 439 aaPredicted RBP5.45□□□□□ -1.54
SNRPF-202ENST00000549580 DGKHQ86XP1 1220 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 ZNF496Q96IT1 587 aaPredicted RBP5.45□□□□□ -1.54
SNRPF-202ENST00000549580 TMEM209Q96SK2 561 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 USP36Q9P275 1121 aaKnown RBP5.45□□□□□ -1.54
SNRPF-202ENST00000549580 RIPOR2Q9Y4F9 1068 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 MRFAP1Q9Y605 127 aa5.45□□□□□ -1.54
SNRPF-202ENST00000549580 LCHNA4D1U4 455 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 PLEKHD1A6NEE1 506 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 RASSF10A6NK89 507 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 TPD52L2O43399 206 aaKnown RBP5.44□□□□□ -1.54
SNRPF-202ENST00000549580 CYP7B1O75881 506 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 MYL1P05976 194 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 PTPN1P18031 435 aaKnown RBP5.44□□□□□ -1.54
SNRPF-202ENST00000549580 VCAM1P19320 739 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 LPOP22079 712 aaPredicted RBP5.44□□□□□ -1.54
SNRPF-202ENST00000549580 CYP2C19P33261 490 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 IL12RB1P42701 662 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 ADCY1Q08828 1119 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 GTF2H3Q13889 308 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 BTBD8Q5XKL5 378 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 DPY19L2P1Q6NXN4 242 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 Q6ZUG5 572 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 RBM12BQ8IXT5 1001 aaKnown RBP5.44□□□□□ -1.54
SNRPF-202ENST00000549580 FUKQ8N0W3 1084 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 CLEC4DQ8WXI8 215 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 PMM1Q92871 262 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 ZG16BQ96DA0 208 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 HSPBAP1Q96EW2 488 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 SLC39A13Q96H72 371 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 ACAP3Q96P50 834 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 POLR3GLQ9BT43 218 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 SEC61A2Q9H9S3 476 aa5.44□□□□□ -1.54
SNRPF-202ENST00000549580 ZNF277Q9NRM2 450 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms