RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 WDR66Q8TBY9 1149 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 SH3RF2Q8TEC5 729 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 SH3RF3Q8TEJ3 882 aaPredicted RBP2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 CHTF18Q8WVB6 975 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 USP7Q93009 1102 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 SYTL4Q96C24 671 aaPredicted RBP2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 SHISA4Q96DD7 197 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 TRMT2BQ96GJ1 504 aaKnown RBP2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 GPR101Q96P66 508 aaPredicted RBP2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 TTC1Q99614 292 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 C22orf23Q9BZE7 217 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 ASPSCR1Q9BZE9 553 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 TRIM8Q9BZR9 551 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 MYH16Q9H6N6 1097 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 DCTPP1Q9H773 170 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 IFT22Q9H7X7 185 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 CABP5Q9NP86 173 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 CATSPERZQ9NTU4 200 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 SPTLC3Q9NUV7 552 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 THG1LQ9NWX6 298 aaKnown RBP2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 TERF2IPQ9NYB0 399 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 ACSL6Q9UKU0 697 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 ZDHHC9Q9Y397 364 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 TAF6LQ9Y6J9 622 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 XRN1Q8IZH2 1706 aaKnown RBP2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 TECPR2O15040 1411 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 EDC4Q6P2E9 1401 aaKnown RBP2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 NCOA3Q9Y6Q9 1424 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 SALL3Q9BXA9 1300 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 CDK12Q9NYV4 1490 aaPredicted RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 FMN2Q9NZ56 1722 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 RTL1A6NKG5 1358 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 PNMA6EA0A0J9YXQ4 647 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 FITM1A5D6W6 292 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 ALG1L2C9J202 215 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 MAN2B1O00754 1011 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 DVL2O14641 736 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 BRINP1O60477 761 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 GAS7O60861 476 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 KRT37O76014 449 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 S100BP04271 92 aaPredicted RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 CHGBP05060 677 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 ZBTB48P10074 688 aaPredicted RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 GLI4P10075 376 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 XRCC6P12956 609 aaKnown RBP eCLIP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 CPEP16870 476 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 PMLP29590 882 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 KCNC1P48547 511 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 GUCY2FP51841 1108 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 SLURP1P55000 103 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 IL2P60568 153 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 LACTBP83111 547 aaPredicted RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 SRSF3P84103 164 aaKnown RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 CHRNEQ04844 493 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 NR0B2Q15466 257 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 SLC14A2Q15849 920 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 CRY1Q16526 586 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 ALDH1L2Q3SY69 923 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 LRCH2Q5VUJ6 765 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 CEP85Q6P2H3 762 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 GALNT18Q6P9A2 607 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 ARHGAP36Q6ZRI8 547 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 NECAB2Q7Z6G3 386 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 NLRX1Q86UT6 975 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 SPATS2Q86XZ4 545 aaKnown RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 PTRH1Q86Y79 214 aaKnown RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 RIOX2Q8IUF8 465 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 NOSTRINQ8IVI9 506 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 RBM12BQ8IXT5 1001 aaKnown RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 C2orf69Q8N8R5 385 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 DDX17Q92841 729 aaKnown RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 LRRC59Q96AG4 307 aaKnown RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 LTV1Q96GA3 475 aaPredicted RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 ZNF747Q9BV97 191 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 CD244Q9BZW8 370 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 CCDC8Q9H0W5 538 aaPredicted RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 EPB41L1Q9H4G0 881 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 RXFP1Q9HBX9 757 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 VTA1Q9NP79 307 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 EMC7Q9NPA0 242 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 PDLIM7Q9NR12 457 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 OXSMQ9NWU1 459 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 SLC5A4Q9NY91 659 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 G3BP2Q9UN86 482 aaKnown RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 APOBEC2Q9Y235 224 aaKnown RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 THRAP3Q9Y2W1 955 aaKnown RBP2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 SIT1Q9Y3P8 196 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 TELO2Q9Y4R8 837 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 HS3ST3A1Q9Y663 406 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 RGPD5Q99666 1765 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 USP6P35125 1406 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 DIP2AQ14689 1571 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 MAPK8IP3Q9UPT6 1336 aa2.91□□□□□ -1.94
DEPDC4-206ENST00000549100 ARHGAP23Q9P227 1491 aa2.9□□□□□ -1.94
DEPDC4-206ENST00000549100 NINLQ9Y2I6 1382 aa2.9□□□□□ -1.94
DEPDC4-206ENST00000549100 A0A1W2PQ27 194 aa2.9□□□□□ -1.95
DEPDC4-206ENST00000549100 A0A1W2PQ64 194 aa2.9□□□□□ -1.95
DEPDC4-206ENST00000549100 A0A1W2PQC6 194 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms