RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 PAWRQ96IZ0 340 aaKnown RBP5.36□□□□□ -1.55
PTCH1-216ENST00000548379 YTHDC1Q96MU7 727 aaKnown RBP5.36□□□□□ -1.55
PTCH1-216ENST00000548379 ACE2Q9BYF1 805 aaPredicted RBP5.36□□□□□ -1.55
PTCH1-216ENST00000548379 KATNBL1Q9H079 304 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 GREM2Q9H772 168 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 CD320Q9NPF0 282 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 GOLGA6AQ9NYA3 693 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 SAE1Q9UBE0 346 aaPredicted RBP5.36□□□□□ -1.55
PTCH1-216ENST00000548379 VWA7Q9Y334 891 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 IPPQ9Y573 584 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 NESP48681 1621 aa5.36□□□□□ -1.55
PTCH1-216ENST00000548379 PRC1O43663 620 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 PI3P19957 117 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 ADCY8P40145 1251 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 MEF2AQ02078 507 aaPredicted RBP5.35□□□□□ -1.55
PTCH1-216ENST00000548379 MINDY4Q4G0A6 757 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 ATAT1Q5SQI0 421 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 TRMT10BQ6PF06 316 aaKnown RBP5.35□□□□□ -1.55
PTCH1-216ENST00000548379 GLB1L2Q8IW92 636 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 REXO1L1PQ8IX06 675 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 UNC5BQ8IZJ1 945 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 NUDT10Q8NFP7 164 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 SLC35G2Q8TBE7 412 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 DACT3Q96B18 629 aaPredicted RBP5.35□□□□□ -1.55
PTCH1-216ENST00000548379 NUDT11Q96G61 164 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 AJUBAQ96IF1 538 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 SLC52A1Q9NWF4 448 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 MAGEL2Q9UJ55 1249 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 SYNPO2Q9UMS6 1093 aa5.35□□□□□ -1.55
PTCH1-216ENST00000548379 HTRA2O43464 458 aaPredicted RBP5.34□□□□□ -1.55
PTCH1-216ENST00000548379 TMEM127O75204 238 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 FARP2O94887 1054 aaPredicted RBP5.34□□□□□ -1.55
PTCH1-216ENST00000548379 LY86O95711 162 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 XPAP23025 273 aaPredicted RBP5.34□□□□□ -1.55
PTCH1-216ENST00000548379 NRG3P56975 720 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 KIF23Q02241 960 aaPredicted RBP5.34□□□□□ -1.55
PTCH1-216ENST00000548379 CD69Q07108 199 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 MGAT2Q10469 447 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 GBX1Q14549 363 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 MAN2A1Q16706 1144 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 MUM1L1Q5H9M0 696 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 CYB5RLQ6IPT4 315 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 CCSAPQ6IQ19 270 aaPredicted RBP5.34□□□□□ -1.55
PTCH1-216ENST00000548379 LILRA6Q6PI73 481 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 ATG14Q6ZNE5 492 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 Q6ZUG5 572 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 KRTAP1-3Q8IUG1 177 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 MIER2Q8N344 545 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 GLB1L3Q8NCI6 653 aaPredicted RBP5.34□□□□□ -1.55
PTCH1-216ENST00000548379 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.34□□□□□ -1.55
PTCH1-216ENST00000548379 ZNF526Q8TF50 670 aaPredicted RBP5.34□□□□□ -1.55
PTCH1-216ENST00000548379 HOXB13Q92826 284 aaPredicted RBP5.34□□□□□ -1.55
PTCH1-216ENST00000548379 HPS3Q969F9 1004 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 CLIP3Q96DZ5 547 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 WDR92Q96MX6 357 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 PWWP2AQ96N64 755 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 PCGF6Q9BYE7 350 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 GTPBP4Q9BZE4 634 aaKnown RBP5.34□□□□□ -1.55
PTCH1-216ENST00000548379 NMRK2Q9NPI5 230 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 OBP2AQ9NY56 170 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 LIMCH1Q9UPQ0 1083 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 SMG5Q9UPR3 1016 aaKnown RBP5.34□□□□□ -1.55
PTCH1-216ENST00000548379 KCTD3Q9Y597 815 aa5.34□□□□□ -1.55
PTCH1-216ENST00000548379 BAZ1AQ9NRL2 1556 aaPredicted RBP5.33□□□□□ -1.56
PTCH1-216ENST00000548379 CCDC194A0A1B0GVG4 234 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 DDX3XO00571 662 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTCH1-216ENST00000548379 FFAR3O14843 346 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 ERC2O15083 957 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 TSPAN15O95858 294 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 C1QTNF9P0C862 333 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 GAAP10253 952 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 HSPA6P17066 643 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 PDCP20941 246 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 SLC16A1P53985 500 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 CCT2P78371 535 aaKnown RBP5.33□□□□□ -1.56
PTCH1-216ENST00000548379 C19orf54Q5BKX5 351 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 KLHDC10Q6PID8 442 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 USP45Q70EL2 814 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 LARP4Q71RC2 724 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTCH1-216ENST00000548379 OTOP2Q7RTS6 562 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 CLEC14AQ86T13 490 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 DGKHQ86XP1 1220 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 PPM1NQ8N819 430 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 PIK3C3Q8NEB9 887 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 NRG4Q8WWG1 115 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 MBD6Q96DN6 1003 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 TAAR9Q96RI9 348 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 PPP1R16BQ96T49 567 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 NTMQ9P121 344 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 GABBR1Q9UBS5 961 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 DNAI1Q9UI46 699 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 CDC42EP3Q9UKI2 254 aa5.33□□□□□ -1.56
PTCH1-216ENST00000548379 C9orf118A6NHY6 69 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 VSTM5A8MXK1 200 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 OFD1O75665 1012 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 FSBPO95073 299 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 HMGCRP04035 888 aa5.32□□□□□ -1.56
PTCH1-216ENST00000548379 LTA4HP09960 611 aaKnown RBP5.32□□□□□ -1.56
PTCH1-216ENST00000548379 HNRNPLP14866 589 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTCH1-216ENST00000548379 CTSSP25774 331 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms