RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 SNX29Q8TEQ0 813 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 SPIRE2Q8WWL2 714 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 NAA15Q9BXJ9 866 aaKnown RBP7.92□□□□□ -1.14
TMEM116-206ENST00000548283 ASCC2Q9H1I8 757 aaPredicted RBP7.92□□□□□ -1.14
TMEM116-206ENST00000548283 RAVER2Q9HCJ3 691 aaKnown RBP7.92□□□□□ -1.14
TMEM116-206ENST00000548283 RNF146Q9NTX7 359 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 ZIM2Q9NZV7 527 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.92□□□□□ -1.14
TMEM116-206ENST00000548283 FAM200BP0CF97 657 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 GTF2A2P52657 109 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 HERVK_113P62684 666 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 PABPC4Q13310 644 aaKnown RBP eCLIP7.92□□□□□ -1.14
TMEM116-206ENST00000548283 GRB14Q14449 540 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 USH1GQ495M9 461 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 MORN1Q5T089 497 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 CST9Q5W186 159 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 LLGL2Q6P1M3 1020 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 CCDC150Q8NCX0 1101 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 NACC1Q96RE7 527 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 XPO4Q9C0E2 1151 aaKnown RBP7.92□□□□□ -1.14
TMEM116-206ENST00000548283 SIK3Q9Y2K2 1263 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 LGALS16A8MUM7 142 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 SKILP12757 684 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 EPB42P16452 691 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 STAT3P40763 770 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 PSMC6P62333 389 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 SNAPC2Q13487 334 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 PRR16Q569H4 304 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 ANKRD40Q6AI12 368 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 SHQ1Q6PI26 577 aaKnown RBP7.92□□□□□ -1.14
TMEM116-206ENST00000548283 TC2NQ8N9U0 490 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 NELFBQ8WX92 580 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 SYN2Q92777 582 aaPredicted RBP7.92□□□□□ -1.14
TMEM116-206ENST00000548283 OPTNQ96CV9 577 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 MOV10L1Q9BXT6 1211 aaKnown RBP7.92□□□□□ -1.14
TMEM116-206ENST00000548283 NFKBIZQ9BYH8 718 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 GEMIN8Q9NWZ8 242 aaKnown RBP7.92□□□□□ -1.14
TMEM116-206ENST00000548283 NFE2L3Q9Y4A8 694 aa7.92□□□□□ -1.14
TMEM116-206ENST00000548283 FAM221BA6H8Z2 402 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 GNA14O95837 355 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 ATP1A3P13637 1013 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 TAL1P17542 331 aaPredicted RBP7.91□□□□□ -1.14
TMEM116-206ENST00000548283 POU5F1BQ06416 359 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 CCDC84Q86UT8 332 aaPredicted RBP7.91□□□□□ -1.14
TMEM116-206ENST00000548283 OLIG1Q8TAK6 271 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 VMP1Q96GC9 406 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 FBXL18Q96ME1 805 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 ZNF577Q9BSK1 485 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 ANKZF1Q9H8Y5 726 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 CUEDC1Q9NWM3 386 aaPredicted RBP7.91□□□□□ -1.14
TMEM116-206ENST00000548283 PSD3Q9NYI0 1048 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 MYH9P35579 1960 aaKnown RBP7.91□□□□□ -1.14
TMEM116-206ENST00000548283 POTEB3A0JP26 581 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 TFRCP02786 760 aaKnown RBP7.91□□□□□ -1.14
TMEM116-206ENST00000548283 HSD3B2P26439 372 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 GCLCP48506 637 aaPredicted RBP7.91□□□□□ -1.14
TMEM116-206ENST00000548283 LMNB2Q03252 620 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 LRCH2Q5VUJ6 765 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 SPRYD7Q5W111 196 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 POTEBQ6S5H4 581 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 TXNRD2Q9NNW7 524 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 TBC1D7Q9P0N9 293 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 CALCOCO1Q9P1Z2 691 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 TMCC3Q9ULS5 477 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 MYO6Q9UM54 1294 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 GDAQ9Y2T3 454 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 CSADQ9Y600 493 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 ZBTB42B2RXF5 422 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 RBAK-RBAKDNI3L0D1 243 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 ADRB2P07550 413 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 NR3C2P08235 984 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 CETPP11597 493 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 CDC25AP30304 524 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 ARID5AQ03989 594 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 PPP2R3AQ06190 1150 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 MTMR1Q13613 665 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 KRT31Q15323 416 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 SNRNP48Q6IEG0 339 aaKnown RBP7.91□□□□□ -1.14
TMEM116-206ENST00000548283 PLPPR4Q7Z2D5 763 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 ZNF720Q7Z2F6 126 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 FRMD5Q7Z6J6 570 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 KAT2BQ92831 832 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 WDR24Q96S15 920 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 PCYT2Q99447 389 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 HOMER2Q9NSB8 354 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 TRMT1Q9NXH9 659 aaKnown RBP7.91□□□□□ -1.14
TMEM116-206ENST00000548283 PHLPP2Q6ZVD8 1323 aa7.91□□□□□ -1.14
TMEM116-206ENST00000548283 N4BP1O75113 896 aaKnown RBP7.9□□□□□ -1.14
TMEM116-206ENST00000548283 ATP4AP20648 1035 aa7.9□□□□□ -1.14
TMEM116-206ENST00000548283 CASP1P29466 404 aa7.9□□□□□ -1.14
TMEM116-206ENST00000548283 TM4SF4P48230 202 aa7.9□□□□□ -1.14
TMEM116-206ENST00000548283 RARRES1P49788 294 aa7.9□□□□□ -1.14
TMEM116-206ENST00000548283 TPM4P67936 248 aa7.9□□□□□ -1.14
TMEM116-206ENST00000548283 SP2Q02086 613 aa7.9□□□□□ -1.14
TMEM116-206ENST00000548283 CDCA2Q69YH5 1023 aaPredicted RBP7.9□□□□□ -1.14
TMEM116-206ENST00000548283 SPECC1LQ69YQ0 1117 aa7.9□□□□□ -1.14
TMEM116-206ENST00000548283 TRIM59Q8IWR1 403 aa7.9□□□□□ -1.14
TMEM116-206ENST00000548283 CLMNQ96JQ2 1002 aa7.9□□□□□ -1.14
TMEM116-206ENST00000548283 REEP2Q9BRK0 252 aa7.9□□□□□ -1.14
TMEM116-206ENST00000548283 RUSC1Q9BVN2 902 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms