RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 HELQQ8TDG4 1101 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 PSPC1Q8WXF1 523 aaKnown RBP11.51□□□□□ -0.57
BEST3-208ENST00000547208 AAASQ9NRG9 546 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 AGPAT5Q9NUQ2 364 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 PCDHB12Q9Y5F1 795 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 MYH11P35749 1972 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 TRIP11Q15643 1979 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 ZNF623O75123 536 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 CD2BP2O95400 341 aaKnown RBP11.5□□□□□ -0.57
BEST3-208ENST00000547208 GLP2RO95838 553 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 SRGAP2CP0DJJ0 459 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 HOXA11P31270 313 aaPredicted RBP11.5□□□□□ -0.57
BEST3-208ENST00000547208 PBX3P40426 434 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 RARRES1P49788 294 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 ERVFC1P60507 584 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 HMGN5P82970 282 aaKnown RBP11.5□□□□□ -0.57
BEST3-208ENST00000547208 PLCB3Q01970 1234 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 ADAM15Q13444 863 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 SAFBQ15424 915 aaKnown RBP eCLIP11.5□□□□□ -0.57
BEST3-208ENST00000547208 CSPP1Q1MSJ5 1256 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 PUS10Q3MIT2 529 aaKnown RBP11.5□□□□□ -0.57
BEST3-208ENST00000547208 TMEM31Q5JXX7 168 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 SPOUT1Q5T280 376 aaKnown RBP11.5□□□□□ -0.57
BEST3-208ENST00000547208 KCNT2Q6UVM3 1135 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 RNF169Q8NCN4 708 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 MSLNLQ96KJ4 702 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 MTRQ99707 1265 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 C1QTNF1Q9BXJ1 281 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 INO80BQ9C086 356 aaPredicted RBP11.5□□□□□ -0.57
BEST3-208ENST00000547208 TLR9Q9NR96 1032 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 ANKEF1Q9NU02 776 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 FAM105AQ9NUU6 356 aa11.5□□□□□ -0.57
BEST3-208ENST00000547208 PIN4Q9Y237 131 aaKnown RBP11.5□□□□□ -0.57
BEST3-208ENST00000547208 A0A087WWV3 80 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 MED24O75448 989 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 ATP2B1P20020 1258 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 U2AF2P26368 475 aaKnown RBP eCLIP11.49□□□□□ -0.57
BEST3-208ENST00000547208 ARL2P36404 184 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 NRIP1P48552 1158 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 ORC2Q13416 577 aaPredicted RBP11.49□□□□□ -0.57
BEST3-208ENST00000547208 RABEP1Q15276 862 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 ZNF174Q15697 407 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 UBXN11Q5T124 520 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 TWF2Q6IBS0 349 aaKnown RBP11.49□□□□□ -0.57
BEST3-208ENST00000547208 CATSPER4Q7RTX7 472 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 SRGAP1Q7Z6B7 1085 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 CATSPER3Q86XQ3 398 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 NOSTRINQ8IVI9 506 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 THNSL1Q8IYQ7 743 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 ABI1Q8IZP0 508 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 SLC39A11Q8N1S5 342 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 EFHBQ8N7U6 833 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 C4orf32Q8N8J7 132 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 RNF149Q8NC42 400 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 ASAP3Q8TDY4 903 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 TCP11Q8WWU5 503 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 MRPS27Q92552 414 aaKnown RBP11.49□□□□□ -0.57
BEST3-208ENST00000547208 LPPQ93052 612 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 PHOX2BQ99453 314 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 IGFLR1Q9H665 355 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 CLEC1BQ9P126 229 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 LZTS1Q9Y250 596 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 PLXNA3P51805 1871 aa11.49□□□□□ -0.57
BEST3-208ENST00000547208 ASAP2O43150 1006 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 MBTPS2O43462 519 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 B4GALT3O60512 393 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 OFD1O75665 1012 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 DGAT1O75907 488 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 OR52Z1P0C646 297 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 SKIP12755 728 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 XRCC6P12956 609 aaKnown RBP eCLIP11.48□□□□□ -0.57
BEST3-208ENST00000547208 TECP42680 631 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 TOB1P50616 345 aaPredicted RBP11.48□□□□□ -0.57
BEST3-208ENST00000547208 PTENP60484 403 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 RBM10P98175 930 aaKnown RBP11.48□□□□□ -0.57
BEST3-208ENST00000547208 POU5F1BQ06416 359 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 CAPSQ13938 189 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 KCNC3Q14003 757 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 NBR1Q14596 966 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 CLUL1Q15846 466 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 DUSP6Q16828 381 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 LONRF3Q496Y0 759 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 TTC38Q5R3I4 469 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 EP400NLQ6ZTU2 488 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 MRPL10Q7Z7H8 261 aaKnown RBP11.48□□□□□ -0.57
BEST3-208ENST00000547208 RBM23Q86U06 439 aaKnown RBP11.48□□□□□ -0.57
BEST3-208ENST00000547208 TMEM173Q86WV6 379 aaPredicted RBP11.48□□□□□ -0.57
BEST3-208ENST00000547208 VN1R2Q8NFZ6 395 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 PIGOQ8TEQ8 1089 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 ZNF558Q96NG5 402 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 POLR3CQ9BUI4 534 aaPredicted RBP11.48□□□□□ -0.57
BEST3-208ENST00000547208 MRPL9Q9BYD2 267 aaKnown RBP11.48□□□□□ -0.57
BEST3-208ENST00000547208 TUFT1Q9NNX1 390 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 PCDHB2Q9Y5E7 798 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 DENND4AQ7Z401 1863 aa11.48□□□□□ -0.57
BEST3-208ENST00000547208 C2orf16Q68DN1 1984 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 C19orf67A6NJJ6 358 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 PER2O15055 1255 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 TSPAN1O60635 241 aa11.47□□□□□ -0.57
BEST3-208ENST00000547208 GLRA2P23416 452 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms