RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.91□□□□□ -0.5
LINC00661-202ENST00000547102 PGBD4Q96DM1 585 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 TRAIPQ9BWF2 469 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 CWH43Q9H720 699 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 TUFT1Q9NNX1 390 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 ENTPD7Q9NQZ7 604 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 FAM105AQ9NUU6 356 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 RNF19AQ9NV58 838 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 HCSTQ9UBK5 93 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 LZTS1Q9Y250 596 aa11.91□□□□□ -0.5
LINC00661-202ENST00000547102 USO1O60763 962 aaKnown RBP11.9□□□□□ -0.5
LINC00661-202ENST00000547102 SRGAP2BP0DMP2 458 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 XRCC6P12956 609 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC00661-202ENST00000547102 ATF7P17544 494 aaPredicted RBP11.9□□□□□ -0.5
LINC00661-202ENST00000547102 SSTR3P32745 418 aaPredicted RBP11.9□□□□□ -0.5
LINC00661-202ENST00000547102 IRS1P35568 1242 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 TECP42680 631 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 NRIP1P48552 1158 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 ALDH7A1P49419 539 aaKnown RBP11.9□□□□□ -0.5
LINC00661-202ENST00000547102 MCM2P49736 904 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 RARRES1P49788 294 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 RNASELQ05823 741 aaKnown RBP11.9□□□□□ -0.5
LINC00661-202ENST00000547102 CAMK1Q14012 370 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 BMS1Q14692 1282 aaKnown RBP11.9□□□□□ -0.5
LINC00661-202ENST00000547102 EFHBQ8N7U6 833 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 MCPH1Q8NEM0 835 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 URGCPQ8TCY9 931 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 PIGOQ8TEQ8 1089 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 MRPS27Q92552 414 aaKnown RBP11.9□□□□□ -0.5
LINC00661-202ENST00000547102 NACC1Q96RE7 527 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 CDCA3Q99618 268 aaPredicted RBP11.9□□□□□ -0.5
LINC00661-202ENST00000547102 RAB34Q9BZG1 259 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 POLR3FQ9H1D9 316 aaPredicted RBP11.9□□□□□ -0.5
LINC00661-202ENST00000547102 TLE6Q9H808 572 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 XPNPEP1Q9NQW7 623 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 SPG21Q9NZD8 308 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 INPP5FQ9Y2H2 1132 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 PCDHB2Q9Y5E7 798 aa11.9□□□□□ -0.5
LINC00661-202ENST00000547102 XIRP2A4UGR9 3374 aa11.9□□□□□ -0.51
LINC00661-202ENST00000547102 BDP1A6H8Y1 2624 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 ARHGEF35A5YM69 484 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 GRXCR2A6NFK2 248 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 H3BQV1 296 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 INO80B-WBP1J3KQ70 363 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 ZNF623O75123 536 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 ZC3H11AO75152 810 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC00661-202ENST00000547102 IL9P15248 144 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 AXLP30530 894 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 GTF2F1P35269 517 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC00661-202ENST00000547102 PTENP60484 403 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 PLCB3Q01970 1234 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 CLUL1Q15846 466 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 CTC1Q2NKJ3 1217 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 LONRF3Q496Y0 759 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 NOMO2Q5JPE7 1267 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 PLPP4Q5VZY2 271 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 MCTP1Q6DN14 999 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 NOTUMQ6P988 496 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 LRRC55Q6ZSA7 311 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 RBM23Q86U06 439 aaKnown RBP11.89□□□□□ -0.51
LINC00661-202ENST00000547102 ASAP3Q8TDY4 903 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 LPPQ93052 612 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 CCDC51Q96ER9 411 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 TMX3Q96JJ7 454 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 TCF25Q9BQ70 676 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 POLR3CQ9BUI4 534 aaPredicted RBP11.89□□□□□ -0.51
LINC00661-202ENST00000547102 MINDY3Q9H8M7 445 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 CD207Q9UJ71 328 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 DBR1Q9UK59 544 aaKnown RBP11.89□□□□□ -0.51
LINC00661-202ENST00000547102 STK24Q9Y6E0 443 aa11.89□□□□□ -0.51
LINC00661-202ENST00000547102 CNTNAP2Q9UHC6 1331 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 TBX10O75333 385 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 MED24O75448 989 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 SPATA31C1P0DKV0 1188 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 U2AF2P26368 475 aaKnown RBP eCLIP11.88□□□□□ -0.51
LINC00661-202ENST00000547102 RPA1P27694 616 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 CA8P35219 290 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 CCT6AP40227 531 aaKnown RBP11.88□□□□□ -0.51
LINC00661-202ENST00000547102 PBX3P40426 434 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 BCAR1P56945 870 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 POU5F1BQ06416 359 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 ADAM15Q13444 863 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 SMAD4Q13485 552 aaKnown RBP11.88□□□□□ -0.51
LINC00661-202ENST00000547102 CAPSQ13938 189 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 POTEGQ6S5H5 508 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 ADGRD2Q7Z7M1 963 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 CATSPER3Q86XQ3 398 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 FAM178BQ8IXR5 827 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 HACE1Q8IYU2 909 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 CNNM3Q8NE01 707 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 TMEM169Q96HH4 297 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 FAM193BQ96PV7 902 aaPredicted RBP11.88□□□□□ -0.51
LINC00661-202ENST00000547102 C1QTNF1Q9BXJ1 281 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 TRIM6Q9C030 488 aaPredicted RBP11.88□□□□□ -0.51
LINC00661-202ENST00000547102 RSAD1Q9HA92 442 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 NGRNQ9NPE2 291 aaKnown RBP11.88□□□□□ -0.51
LINC00661-202ENST00000547102 PCDHGC5Q9Y5F6 944 aa11.88□□□□□ -0.51
LINC00661-202ENST00000547102 LRRIQ4A6NIV6 560 aa11.87□□□□□ -0.51
LINC00661-202ENST00000547102 LAD1O00515 517 aa11.87□□□□□ -0.51
LINC00661-202ENST00000547102 FSCN2O14926 492 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms