RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 TLR9Q9NR96 1032 aa29.43■■■□□ 2.3
SRSF9-202ENST00000546942 FAM105AQ9NUU6 356 aa29.43■■■□□ 2.3
SRSF9-202ENST00000546942 GRXCR2A6NFK2 248 aa29.42■■■□□ 2.3
SRSF9-202ENST00000546942 ERVFC1P60507 584 aa29.42■■■□□ 2.3
SRSF9-202ENST00000546942 UBE3AQ05086 875 aa29.42■■■□□ 2.3
SRSF9-202ENST00000546942 CTC1Q2NKJ3 1217 aa29.42■■■□□ 2.3
SRSF9-202ENST00000546942 ZNF558Q96NG5 402 aa29.42■■■□□ 2.3
SRSF9-202ENST00000546942 AGPAT5Q9NUQ2 364 aa29.42■■■□□ 2.3
SRSF9-202ENST00000546942 NOL7Q9UMY1 257 aaKnown RBP29.42■■■□□ 2.3
SRSF9-202ENST00000546942 DGAT1O75907 488 aa29.41■■■□□ 2.3
SRSF9-202ENST00000546942 SPATA31C1P0DKV0 1188 aa29.41■■■□□ 2.3
SRSF9-202ENST00000546942 SKIP12755 728 aa29.41■■■□□ 2.3
SRSF9-202ENST00000546942 RARRES1P49788 294 aa29.41■■■□□ 2.3
SRSF9-202ENST00000546942 PUS10Q3MIT2 529 aaKnown RBP29.41■■■□□ 2.3
SRSF9-202ENST00000546942 CATSPER3Q86XQ3 398 aa29.41■■■□□ 2.3
SRSF9-202ENST00000546942 TRAIPQ9BWF2 469 aa29.41■■■□□ 2.3
SRSF9-202ENST00000546942 INPP5FQ9Y2H2 1132 aa29.41■■■□□ 2.3
SRSF9-202ENST00000546942 MEIS3P2A8K0S8 358 aa29.4■■■□□ 2.3
SRSF9-202ENST00000546942 PER2O15055 1255 aa29.4■■■□□ 2.3
SRSF9-202ENST00000546942 USO1O60763 962 aaKnown RBP29.4■■■□□ 2.3
SRSF9-202ENST00000546942 MED24O75448 989 aa29.4■■■□□ 2.3
SRSF9-202ENST00000546942 NDUFV1P49821 464 aa29.4■■■□□ 2.3
SRSF9-202ENST00000546942 ADAM15Q13444 863 aa29.4■■■□□ 2.3
SRSF9-202ENST00000546942 MXD4Q14582 209 aaPredicted RBP29.4■■■□□ 2.3
SRSF9-202ENST00000546942 MAEAQ7L5Y9 396 aa29.4■■■□□ 2.3
SRSF9-202ENST00000546942 ASAP3Q8TDY4 903 aa29.4■■■□□ 2.3
SRSF9-202ENST00000546942 MRPL9Q9BYD2 267 aaKnown RBP29.4■■■□□ 2.3
SRSF9-202ENST00000546942 TLE6Q9H808 572 aa29.4■■■□□ 2.3
SRSF9-202ENST00000546942 PCDHB2Q9Y5E7 798 aa29.4■■■□□ 2.3
SRSF9-202ENST00000546942 C5orf42Q9H799 3197 aa29.4■■■□□ 2.3
SRSF9-202ENST00000546942 CD2BP2O95400 341 aaKnown RBP29.39■■■□□ 2.3
SRSF9-202ENST00000546942 RAB27AP51159 221 aa29.39■■■□□ 2.3
SRSF9-202ENST00000546942 ORC2Q13416 577 aaPredicted RBP29.39■■■□□ 2.3
SRSF9-202ENST00000546942 TFDP1Q14186 410 aa29.39■■■□□ 2.3
SRSF9-202ENST00000546942 ERMNQ8TAM6 284 aa29.39■■■□□ 2.3
SRSF9-202ENST00000546942 MRPS27Q92552 414 aaKnown RBP29.39■■■□□ 2.3
SRSF9-202ENST00000546942 TUFT1Q9NNX1 390 aa29.39■■■□□ 2.3
SRSF9-202ENST00000546942 SPG21Q9NZD8 308 aa29.39■■■□□ 2.3
SRSF9-202ENST00000546942 PUF60Q9UHX1 559 aaKnown RBP29.39■■■□□ 2.3
SRSF9-202ENST00000546942 NT5C1B-RDH14C9J2C7 533 aa29.38■■■□□ 2.29
SRSF9-202ENST00000546942 TBX10O75333 385 aa29.38■■■□□ 2.29
SRSF9-202ENST00000546942 ERLIN2O94905 339 aa29.38■■■□□ 2.29
SRSF9-202ENST00000546942 KRT17Q04695 432 aa29.38■■■□□ 2.29
SRSF9-202ENST00000546942 PLPP4Q5VZY2 271 aa29.38■■■□□ 2.29
SRSF9-202ENST00000546942 MCTP1Q6DN14 999 aa29.38■■■□□ 2.29
SRSF9-202ENST00000546942 POTEGQ6S5H5 508 aa29.38■■■□□ 2.29
SRSF9-202ENST00000546942 GLB1LQ6UWU2 654 aa29.38■■■□□ 2.29
SRSF9-202ENST00000546942 FAM178BQ8IXR5 827 aa29.38■■■□□ 2.29
SRSF9-202ENST00000546942 TMX3Q96JJ7 454 aa29.38■■■□□ 2.29
SRSF9-202ENST00000546942 CD320Q9NPF0 282 aa29.38■■■□□ 2.29
SRSF9-202ENST00000546942 ENTPD7Q9NQZ7 604 aa29.38■■■□□ 2.29
SRSF9-202ENST00000546942 INO80B-WBP1J3KQ70 363 aa29.37■■■□□ 2.29
SRSF9-202ENST00000546942 XRCC6P12956 609 aaKnown RBP eCLIP29.37■■■□□ 2.29
SRSF9-202ENST00000546942 U2AF2P26368 475 aaKnown RBP eCLIP29.37■■■□□ 2.29
SRSF9-202ENST00000546942 HOXA11P31270 313 aaPredicted RBP29.37■■■□□ 2.29
SRSF9-202ENST00000546942 SSTR3P32745 418 aaPredicted RBP29.37■■■□□ 2.29
SRSF9-202ENST00000546942 ARL2P36404 184 aa29.37■■■□□ 2.29
SRSF9-202ENST00000546942 TRAPPC10P48553 1259 aa29.37■■■□□ 2.29
SRSF9-202ENST00000546942 PTENP60484 403 aa29.37■■■□□ 2.29
SRSF9-202ENST00000546942 PLCB3Q01970 1234 aa29.37■■■□□ 2.29
SRSF9-202ENST00000546942 PGBD4Q96DM1 585 aa29.37■■■□□ 2.29
SRSF9-202ENST00000546942 TCF25Q9BQ70 676 aa29.37■■■□□ 2.29
SRSF9-202ENST00000546942 POLR3CQ9BUI4 534 aaPredicted RBP29.37■■■□□ 2.29
SRSF9-202ENST00000546942 POLR3FQ9H1D9 316 aaPredicted RBP29.37■■■□□ 2.29
SRSF9-202ENST00000546942 FAM50BQ9Y247 325 aa29.37■■■□□ 2.29
SRSF9-202ENST00000546942 ZNF623O75123 536 aa29.36■■■□□ 2.29
SRSF9-202ENST00000546942 ZC3H11AO75152 810 aaKnown RBP eCLIP29.36■■■□□ 2.29
SRSF9-202ENST00000546942 PPM1AP35813 382 aa29.36■■■□□ 2.29
SRSF9-202ENST00000546942 ALDH7A1P49419 539 aaKnown RBP29.36■■■□□ 2.29
SRSF9-202ENST00000546942 BCAR1P56945 870 aa29.36■■■□□ 2.29
SRSF9-202ENST00000546942 RNASELQ05823 741 aaKnown RBP29.36■■■□□ 2.29
SRSF9-202ENST00000546942 CAPSQ13938 189 aa29.36■■■□□ 2.29
SRSF9-202ENST00000546942 NOMO2Q5JPE7 1267 aa29.36■■■□□ 2.29
SRSF9-202ENST00000546942 EFHBQ8N7U6 833 aa29.36■■■□□ 2.29
SRSF9-202ENST00000546942 CPB2Q96IY4 423 aa29.36■■■□□ 2.29
SRSF9-202ENST00000546942 NACC1Q96RE7 527 aa29.36■■■□□ 2.29
SRSF9-202ENST00000546942 GBP3Q9H0R5 595 aa29.36■■■□□ 2.29
SRSF9-202ENST00000546942 GPRC5CQ9NQ84 441 aa29.36■■■□□ 2.29
SRSF9-202ENST00000546942 LZTS1Q9Y250 596 aa29.36■■■□□ 2.29
SRSF9-202ENST00000546942 KIF3AQ9Y496 699 aa29.36■■■□□ 2.29
SRSF9-202ENST00000546942 PCDHB6Q9Y5E3 794 aa29.36■■■□□ 2.29
SRSF9-202ENST00000546942 OFD1O75665 1012 aa29.35■■■□□ 2.29
SRSF9-202ENST00000546942 GLRA2P23416 452 aa29.35■■■□□ 2.29
SRSF9-202ENST00000546942 TOB1P50616 345 aaPredicted RBP29.35■■■□□ 2.29
SRSF9-202ENST00000546942 NCBP1Q09161 790 aaKnown RBP29.35■■■□□ 2.29
SRSF9-202ENST00000546942 UBXN11Q5T124 520 aa29.35■■■□□ 2.29
SRSF9-202ENST00000546942 C4orf32Q8N8J7 132 aa29.35■■■□□ 2.29
SRSF9-202ENST00000546942 TBC1D13Q9NVG8 400 aa29.35■■■□□ 2.29
SRSF9-202ENST00000546942 CD207Q9UJ71 328 aa29.35■■■□□ 2.29
SRSF9-202ENST00000546942 FSCN2O14926 492 aa29.34■■■□□ 2.29
SRSF9-202ENST00000546942 TSPAN1O60635 241 aa29.34■■■□□ 2.29
SRSF9-202ENST00000546942 RPA1P27694 616 aa29.34■■■□□ 2.29
SRSF9-202ENST00000546942 PTGDRQ13258 359 aa29.34■■■□□ 2.29
SRSF9-202ENST00000546942 PDE12Q6L8Q7 609 aaKnown RBP29.34■■■□□ 2.29
SRSF9-202ENST00000546942 TMC7Q7Z402 723 aa29.34■■■□□ 2.29
SRSF9-202ENST00000546942 GJD3Q8N144 294 aa29.34■■■□□ 2.29
SRSF9-202ENST00000546942 SLC39A11Q8N1S5 342 aa29.34■■■□□ 2.29
SRSF9-202ENST00000546942 DBR1Q9UK59 544 aaKnown RBP29.34■■■□□ 2.29
SRSF9-202ENST00000546942 BARX2Q9UMQ3 279 aaPredicted RBP29.34■■■□□ 2.29
SRSF9-202ENST00000546942 GJB2P29033 226 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms