RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 DENND3A2RUS2 1198 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 FOXO6A8MYZ6 492 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 HMGB1P1B2RPK0 211 aaPredicted RBP10.55□□□□□ -0.72
TRAF1-203ENST00000546084 TLR2O60603 784 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 FOSP01100 380 aaPredicted RBP10.55□□□□□ -0.72
TRAF1-203ENST00000546084 POTEJP0CG39 1038 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 DLG4P78352 724 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 DR1Q01658 176 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 PSMD2Q13200 908 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 ORC1Q13415 861 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 RC3H1Q5TC82 1133 aaKnown RBP10.55□□□□□ -0.72
TRAF1-203ENST00000546084 ZNF662Q6ZS27 426 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 BARGINQ6ZT62 677 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 FAM47EQ6ZV65 393 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 TMEM143Q96AN5 459 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 MTMR9Q96QG7 549 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 INTS2Q9H0H0 1204 aaKnown RBP10.55□□□□□ -0.72
TRAF1-203ENST00000546084 METTL14Q9HCE5 456 aaKnown RBP10.55□□□□□ -0.72
TRAF1-203ENST00000546084 RNF19AQ9NV58 838 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 COX16Q9P0S2 106 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 MTUS1Q9ULD2 1270 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 MAP3K6O95382 1288 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 FXR2P51116 673 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRAF1-203ENST00000546084 EAPPQ56P03 285 aaPredicted RBP10.55□□□□□ -0.72
TRAF1-203ENST00000546084 PPP4R3AQ6IN85 833 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 SPATS2Q86XZ4 545 aaKnown RBP10.55□□□□□ -0.72
TRAF1-203ENST00000546084 SUGP1Q8IWZ8 645 aaKnown RBP10.55□□□□□ -0.72
TRAF1-203ENST00000546084 THNSL1Q8IYQ7 743 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 ZSWIM2Q8NEG5 633 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 RNF217Q8TC41 542 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 CAVIN3Q969G5 261 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 ZKSCAN4Q969J2 545 aaPredicted RBP10.55□□□□□ -0.72
TRAF1-203ENST00000546084 FMO2Q99518 471 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 TAF1DQ9H5J8 278 aaPredicted RBP10.55□□□□□ -0.72
TRAF1-203ENST00000546084 ZHX2Q9Y6X8 837 aa10.55□□□□□ -0.72
TRAF1-203ENST00000546084 KIF1AQ12756 1690 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 GRID2IPA4D2P6 1211 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 MTMR2Q13614 643 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 RASA3Q14644 834 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 DLK2Q6UY11 383 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 LRRC55Q6ZSA7 311 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 PRUNE1Q86TP1 453 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 CBWD2Q8IUF1 395 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 CACNA2D3Q8IZS8 1091 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 DNAJC19Q96DA6 116 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 NUCKS1Q9H1E3 243 aaKnown RBP10.54□□□□□ -0.72
TRAF1-203ENST00000546084 VPS37BQ9H9H4 285 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 KLC4Q9NSK0 619 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 TYW1Q9NV66 732 aaKnown RBP10.54□□□□□ -0.72
TRAF1-203ENST00000546084 GABBR1Q9UBS5 961 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 ANAPC7Q9UJX3 599 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 AGTPBP1Q9UPW5 1226 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 KRT15P19012 456 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 POLGP54098 1239 aaPredicted RBP10.54□□□□□ -0.72
TRAF1-203ENST00000546084 HMGCS2P54868 508 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 TFAMQ00059 246 aaKnown RBP10.54□□□□□ -0.72
TRAF1-203ENST00000546084 CBWD6Q4V339 395 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 CBWD3Q5JTY5 395 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 CBWD5Q5RIA9 395 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 KDM7AQ6ZMT4 941 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 HAUS6Q7Z4H7 955 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 NCAPG2Q86XI2 1143 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 ELAC2Q9BQ52 826 aaKnown RBP10.54□□□□□ -0.72
TRAF1-203ENST00000546084 IMPG2Q9BZV3 1241 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 CXorf56Q9H5V9 222 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 YY1AP1Q9H869 796 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 IRAK4Q9NWZ3 460 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 AKAP11Q9UKA4 1901 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 SSU72P8A0A1W2PR75 194 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 GMNCA6NCL1 334 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 POLRMTO00411 1230 aaKnown RBP10.54□□□□□ -0.72
TRAF1-203ENST00000546084 CPP00450 1065 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 FERP16591 822 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 MAPK4P31152 587 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 PRELPP51888 382 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 SKOR1P84550 965 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 DMP1Q13316 513 aaPredicted RBP10.54□□□□□ -0.72
TRAF1-203ENST00000546084 ARSHQ5FYA8 562 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 PALB2Q86YC2 1186 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 IQCKQ8N0W5 287 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 CCDC33Q8N5R6 958 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 IFT74Q96LB3 600 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 FAM198AQ9UFP1 575 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 PNMA2Q9UL42 364 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 ZNF148Q9UQR1 794 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 PCDHB4Q9Y5E5 795 aa10.54□□□□□ -0.72
TRAF1-203ENST00000546084 CLDN3O15551 220 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 ZBED4O75132 1171 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 FMO5P49326 533 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 JAG1P78504 1218 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 ITIH3Q06033 890 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 SGO2Q562F6 1265 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 C10orf76Q5T2E6 689 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 SCYL2Q6P3W7 929 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 CPNE8Q86YQ8 564 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 CCDC13Q8IYE1 715 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 BAP1Q92560 729 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 CYFIP2Q96F07 1278 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 TAAR1Q96RJ0 339 aa10.53□□□□□ -0.72
TRAF1-203ENST00000546084 GLT8D2Q9H1C3 349 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms