RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 GDAQ9Y2T3 454 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 ANO9A1A5B4 782 aa12.46□□□□□ -0.42
CIT-217ENST00000545913 NSUN6Q8TEA1 469 aaKnown RBP12.46□□□□□ -0.42
CIT-217ENST00000545913 ZNF302Q9NR11 478 aa12.46□□□□□ -0.42
CIT-217ENST00000545913 ABCF3Q9NUQ8 709 aa12.46□□□□□ -0.42
CIT-217ENST00000545913 HEATR6Q6AI08 1181 aaKnown RBP12.46□□□□□ -0.42
CIT-217ENST00000545913 SZRD1Q7Z422 152 aa12.46□□□□□ -0.42
CIT-217ENST00000545913 ZNF564Q8TBZ8 553 aaPredicted RBP12.46□□□□□ -0.42
CIT-217ENST00000545913 OSBPL9Q96SU4 736 aa12.46□□□□□ -0.42
CIT-217ENST00000545913 LY9Q9HBG7 655 aa12.46□□□□□ -0.42
CIT-217ENST00000545913 ZNF521Q96K83 1311 aa12.46□□□□□ -0.42
CIT-217ENST00000545913 NNMTP40261 264 aa12.46□□□□□ -0.42
CIT-217ENST00000545913 QARSP47897 775 aaKnown RBP12.46□□□□□ -0.42
CIT-217ENST00000545913 SUSD4Q5VX71 490 aa12.46□□□□□ -0.42
CIT-217ENST00000545913 ZC3H18Q86VM9 953 aaKnown RBP12.46□□□□□ -0.42
CIT-217ENST00000545913 MTBPQ96DY7 904 aa12.46□□□□□ -0.42
CIT-217ENST00000545913 CEP95Q96GE4 821 aa12.46□□□□□ -0.42
CIT-217ENST00000545913 KIF17Q9P2E2 1029 aa12.46□□□□□ -0.42
CIT-217ENST00000545913 CPDO75976 1380 aa12.46□□□□□ -0.42
CIT-217ENST00000545913 TRIM45Q9H8W5 580 aaPredicted RBP12.45□□□□□ -0.42
CIT-217ENST00000545913 NDE1Q9NXR1 346 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 NOP53Q9NZM5 478 aaKnown RBP12.45□□□□□ -0.42
CIT-217ENST00000545913 NEDD4P46934 1319 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 ENAHQ8N8S7 591 aaPredicted RBP12.45□□□□□ -0.42
CIT-217ENST00000545913 ALKBH8Q96BT7 664 aaKnown RBP12.45□□□□□ -0.42
CIT-217ENST00000545913 MBD5Q9P267 1494 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 E9PCH4 1651 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 COL15A1P39059 1388 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 MMP10P09238 476 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 CHRNA3P32297 505 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 COPB2P35606 906 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 GCLMP48507 274 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 NSUN2Q08J23 767 aaKnown RBP eCLIP12.45□□□□□ -0.42
CIT-217ENST00000545913 ITPRIPL1Q6GPH6 555 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 RCSD1Q6JBY9 416 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 TRIML2Q8N7C3 387 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 PVALEFA0A1B0GWK0 134 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 BNIP3LO60238 219 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 CYP2E1P05181 493 aaPredicted RBP12.45□□□□□ -0.42
CIT-217ENST00000545913 GFPT1Q06210 699 aaPredicted RBP12.45□□□□□ -0.42
CIT-217ENST00000545913 NFX1Q12986 1120 aaKnown RBP12.45□□□□□ -0.42
CIT-217ENST00000545913 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.45□□□□□ -0.427e-7■■■□□ 14.6
CIT-217ENST00000545913 GTSE1Q9NYZ3 720 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 ZFP69BQ9UJL9 534 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 LRRC53A6NM62 1247 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 DDX5P17844 614 aaKnown RBP12.45□□□□□ -0.42
CIT-217ENST00000545913 SDC4P31431 198 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 HABP4Q5JVS0 413 aaKnown RBP12.45□□□□□ -0.42
CIT-217ENST00000545913 N4BP2L2Q92802 583 aaPredicted RBP12.45□□□□□ -0.42
CIT-217ENST00000545913 TMEM47Q9BQJ4 181 aa12.45□□□□□ -0.42
CIT-217ENST00000545913 PIK3R2O00459 728 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 AP2B1P63010 937 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 GPS1Q13098 491 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 AFG1LQ8WV93 481 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 ELAC2Q9BQ52 826 aaKnown RBP12.44□□□□□ -0.42
CIT-217ENST00000545913 CSPG5O95196 566 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 TOB2Q14106 344 aaPredicted RBP12.44□□□□□ -0.42
CIT-217ENST00000545913 ZNF394Q53GI3 561 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 SNRNP48Q6IEG0 339 aaKnown RBP12.44□□□□□ -0.42
CIT-217ENST00000545913 FBXO38Q6PIJ6 1188 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 SFR1Q86XK3 245 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 PDCD6IPQ8WUM4 868 aaKnown RBP12.44□□□□□ -0.42
CIT-217ENST00000545913 CYTH2Q99418 400 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 FAM213AQ9BRX8 229 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 ASPSCR1Q9BZE9 553 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 CAPN11Q9UMQ6 739 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 MINPP1Q9UNW1 487 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 FARP1Q9Y4F1 1045 aaPredicted RBP12.44□□□□□ -0.42
CIT-217ENST00000545913 MROH7-TTC4A0A0A0MT08 1334 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 ZC3H13Q5T200 1668 aaKnown RBP12.44□□□□□ -0.42
CIT-217ENST00000545913 ZBBXA8MT70 800 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 FOXP2O15409 715 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 CTIFO43310 598 aaKnown RBP12.44□□□□□ -0.42
CIT-217ENST00000545913 RHPN2Q8IUC4 686 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 THNSL1Q8IYQ7 743 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 SNF8Q96H20 258 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 DNAJC17Q9NVM6 304 aaKnown RBP12.44□□□□□ -0.42
CIT-217ENST00000545913 H7C1W4 665 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 LARGE1O95461 756 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 SNAP25P60880 206 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 ROR1Q01973 937 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 C2orf69Q8N8R5 385 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 PARVAQ9NVD7 372 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 VIRMAQ69YN4 1812 aaKnown RBP12.44□□□□□ -0.42
CIT-217ENST00000545913 SETBP1Q9Y6X0 1596 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 VGLL3A8MV65 326 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 FDX1P10109 184 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 AP1B1Q10567 949 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 BEND6Q5SZJ8 279 aaPredicted RBP12.44□□□□□ -0.42
CIT-217ENST00000545913 SCN4BQ8IWT1 228 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 ULK4Q96C45 1275 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 PIM2Q9P1W9 311 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 LRRC7Q96NW7 1537 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 CREB3O43889 395 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 ZBED2Q9BTP6 218 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 TAF1DQ9H5J8 278 aaPredicted RBP12.44□□□□□ -0.42
CIT-217ENST00000545913 ANP32DO95626 131 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 ADRA2BP18089 450 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 AP3M2P53677 418 aa12.44□□□□□ -0.42
CIT-217ENST00000545913 GRM4Q14833 912 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms