RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TRPA1O75762 1119 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 SAT1P21673 171 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 MYL7Q01449 175 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 RAD51Q06609 339 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 ARL13BQ3SXY8 428 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 ACCSLQ4AC99 568 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 TMTC4Q5T4D3 741 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 TYW1BQ6NUM6 668 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 AK8Q96MA6 479 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 MAP3K20Q9NYL2 800 aaKnown RBP9.24□□□□□ -0.93
CLIP1-218ENST00000545889 AMFRQ9UKV5 643 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 UTP11Q9Y3A2 253 aaKnown RBP9.24□□□□□ -0.93
CLIP1-218ENST00000545889 ANGPTL3Q9Y5C1 460 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 PCDHA5Q9Y5H7 936 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 SHANK3Q9BYB0 1731 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 CYTH3O43739 400 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 PPP6R2O75170 966 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 LDHAP00338 332 aaKnown RBP9.24□□□□□ -0.93
CLIP1-218ENST00000545889 IER5Q5VY09 327 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 SWSAP1Q6NVH7 229 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 AFG1LQ8WV93 481 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 LPAR1Q92633 364 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 SAAL1Q96ER3 474 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 KIAA1468Q9P260 1216 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 TMX2Q9Y320 296 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 TRIM17Q9Y577 477 aa9.24□□□□□ -0.93
CLIP1-218ENST00000545889 PHLPP2Q6ZVD8 1323 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 BUB1BO60566 1050 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-218ENST00000545889 VPS41P49754 854 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 MXI1P50539 228 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 KRT17Q04695 432 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 FAM81BQ96LP2 452 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 SLC7A5P2Q9GIP4 190 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 YIPF3Q9GZM5 350 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 MAGED2Q9UNF1 606 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-218ENST00000545889 CLIC2O15247 247 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 H2AFZP0C0S5 128 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 RAG1P15918 1043 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 KRT15P19012 456 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 PTGER2P43116 358 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 FANCCQ00597 558 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 H2AFVQ71UI9 128 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 TMTC1Q8IUR5 882 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 ATP6V1E2Q96A05 226 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 IQCDQ96DY2 449 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 PSMB7Q99436 277 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 VPS37BQ9H9H4 285 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 AAASQ9NRG9 546 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 BAIAP2L1Q9UHR4 511 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 SRPRBQ9Y5M8 271 aaKnown RBP9.23□□□□□ -0.93
CLIP1-218ENST00000545889 A0A1W2PQ27 194 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 A0A1W2PQ64 194 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 A0A1W2PQD8 194 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 TADA2AO75478 443 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 SLC25A27O95847 323 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 YBX3P16989 372 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLIP1-218ENST00000545889 ATP5DP30049 168 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 RGS2P41220 211 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 BACE1P56817 501 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 BAATQ14032 418 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-218ENST00000545889 PKN1Q16512 942 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 GLB1LQ6UWU2 654 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 LRRC31Q6UY01 552 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 USP49Q70CQ1 688 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 SDCCAG8Q86SQ7 713 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-218ENST00000545889 SMYD4Q8IYR2 804 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-218ENST00000545889 MIEF2Q96C03 454 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 C2orf40Q9H1Z8 148 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 GOLPH3LQ9H4A5 285 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 GABBR1Q9UBS5 961 aa9.23□□□□□ -0.93
CLIP1-218ENST00000545889 TTC36A6NLP5 189 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 GGPS1O95749 300 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 TUBB4AP04350 444 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 POLR2FP61218 127 aaKnown RBP9.22□□□□□ -0.93
CLIP1-218ENST00000545889 FKBP1CQ5VVH2 108 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 C8orf74Q6P047 294 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 CCDC121Q6ZUS5 278 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 TAB3Q8N5C8 712 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-218ENST00000545889 MB21D1Q8N884 522 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 PGBD4Q96DM1 585 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 CDCA5Q96FF9 252 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 CUEDC2Q9H467 287 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 MAGEF1Q9HAY2 307 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 ABCF3Q9NUQ8 709 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 PIN4Q9Y237 131 aaKnown RBP9.22□□□□□ -0.93
CLIP1-218ENST00000545889 ATP11BQ9Y2G3 1177 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 RNF40O75150 1001 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 TBC1D8O95759 1140 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 S100BP04271 92 aaPredicted RBP9.22□□□□□ -0.93
CLIP1-218ENST00000545889 VCAM1P19320 739 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 BTBD8Q5XKL5 378 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 ANKRD13CQ8N6S4 541 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 DNAAF3Q8N9W5 541 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 TMEM169Q96HH4 297 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 MMTAG2Q9BU76 263 aaKnown RBP9.22□□□□□ -0.93
CLIP1-218ENST00000545889 ZNF148Q9UQR1 794 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 MAD1L1Q9Y6D9 718 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 NUP188Q5SRE5 1749 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 PRRG1O14668 218 aa9.22□□□□□ -0.93
CLIP1-218ENST00000545889 GNGT1P63211 74 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms