RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 LRSAM1Q6UWE0 723 aa17.55■□□□□ 0.4
CLSTN3-216ENST00000545663 UNQ6494/PRO21346Q6UXR6 183 aa17.55■□□□□ 0.4
CLSTN3-216ENST00000545663 CYB5R4Q7L1T6 521 aa17.55■□□□□ 0.4
CLSTN3-216ENST00000545663 TRMT1LQ7Z2T5 733 aaKnown RBP17.55■□□□□ 0.4
CLSTN3-216ENST00000545663 CHMP4BQ9H444 224 aaKnown RBP17.55■□□□□ 0.4
CLSTN3-216ENST00000545663 PIDD1Q9HB75 910 aa17.55■□□□□ 0.4
CLSTN3-216ENST00000545663 MRPL17Q9NRX2 175 aaKnown RBP17.55■□□□□ 0.4
CLSTN3-216ENST00000545663 INPP5FQ9Y2H2 1132 aa17.55■□□□□ 0.4
CLSTN3-216ENST00000545663 SALL3Q9BXA9 1300 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 IGKV6D-21A0A0A0MT36 114 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 BACH1O14867 736 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 TM4SF5O14894 197 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 TEX28O15482 410 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 CCNE2O96020 404 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 CLCN3P51790 818 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 AK2P54819 239 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 UBE2SQ16763 222 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 ZNF484Q5JVG2 852 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 IL31Q6EBC2 164 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 CYP26C1Q6V0L0 522 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 CELF5Q8N6W0 485 aaKnown RBP17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 DDX1Q92499 740 aaKnown RBP17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 MAP4K1Q92918 833 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 RHOBTB2Q9BYZ6 727 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 NT5C3AQ9H0P0 336 aa17.54■□□□□ 0.4
CLSTN3-216ENST00000545663 MAFGO15525 162 aa17.53■□□□□ 0.4
CLSTN3-216ENST00000545663 LRP3O75074 770 aa17.53■□□□□ 0.4
CLSTN3-216ENST00000545663 EIF4BP23588 611 aaKnown RBP17.53■□□□□ 0.4
CLSTN3-216ENST00000545663 SLC26A2P50443 739 aa17.53■□□□□ 0.4
CLSTN3-216ENST00000545663 RNASELQ05823 741 aaKnown RBP17.53■□□□□ 0.4
CLSTN3-216ENST00000545663 SRSF5Q13243 272 aaKnown RBP17.53■□□□□ 0.4
CLSTN3-216ENST00000545663 NOMO2Q5JPE7 1267 aa17.53■□□□□ 0.4
CLSTN3-216ENST00000545663 CCDC60Q8IWA6 550 aaPredicted RBP17.53■□□□□ 0.4
CLSTN3-216ENST00000545663 KDF1Q8NAX2 398 aaPredicted RBP17.53■□□□□ 0.4
CLSTN3-216ENST00000545663 SDF4Q9BRK5 362 aa17.53■□□□□ 0.4
CLSTN3-216ENST00000545663 FAM217BQ9NTX9 383 aaPredicted RBP17.53■□□□□ 0.4
CLSTN3-216ENST00000545663 COL1A2P08123 1366 aa17.53■□□□□ 0.4
CLSTN3-216ENST00000545663 DDX39AO00148 427 aaKnown RBP17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 DDHD2O94830 711 aa17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 GLUD1P00367 558 aa17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 MAGEA9P43362 315 aa17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 RING1Q06587 406 aa17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 PDXDC2PQ6P474 469 aa17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 ABHD15Q6UXT9 468 aa17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 PALB2Q86YC2 1186 aa17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 PHKBQ93100 1093 aa17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 RPS6KC1Q96S38 1066 aa17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 FAM126AQ9BYI3 521 aaPredicted RBP17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 RXFP3Q9NSD7 469 aa17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 AKT3Q9Y243 479 aa17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 MYH15Q9Y2K3 1946 aa17.52■□□□□ 0.4
CLSTN3-216ENST00000545663 MAST4O15021 2626 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 LAMA5O15230 3695 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 SHISA7A6NL88 538 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 SRRM3A6NNA2 597 aaPredicted RBP17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 HRO43593 1189 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 OFD1O75665 1012 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 SPINK2P20155 84 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 PHKA2P46019 1235 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 RPS9P46781 194 aaKnown RBP17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 NT5C2P49902 561 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 AFF1P51825 1210 aaKnown RBP17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 NTHL1P78549 312 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 SWSAP1Q6NVH7 229 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 TPRG1Q6ZUI0 275 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 LRRC71Q8N4P6 559 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 MXRA8Q9BRK3 442 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 KRT23Q9C075 422 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 PSTPIP2Q9H939 334 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 LHX6Q9UPM6 363 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 BPTFQ12830 3046 aa17.51■□□□□ 0.39
CLSTN3-216ENST00000545663 NFASCO94856 1347 aa17.5■□□□□ 0.39
CLSTN3-216ENST00000545663 ADH1AP07327 375 aa17.5■□□□□ 0.39
CLSTN3-216ENST00000545663 DARSP14868 501 aaKnown RBP17.5■□□□□ 0.39
CLSTN3-216ENST00000545663 FSHRP23945 695 aa17.5■□□□□ 0.39
CLSTN3-216ENST00000545663 SIM2Q14190 667 aaPredicted RBP17.5■□□□□ 0.39
CLSTN3-216ENST00000545663 SF3A2Q15428 464 aaKnown RBP17.5■□□□□ 0.39
CLSTN3-216ENST00000545663 GLB1LQ6UWU2 654 aa17.5■□□□□ 0.39
CLSTN3-216ENST00000545663 KXD1Q9BQD3 176 aa17.5■□□□□ 0.39
CLSTN3-216ENST00000545663 AGO4Q9HCK5 861 aaKnown RBP17.5■□□□□ 0.39
CLSTN3-216ENST00000545663 PCDHA6Q9UN73 950 aa17.5■□□□□ 0.39
CLSTN3-216ENST00000545663 PCDHA8Q9Y5H6 950 aa17.5■□□□□ 0.39
CLSTN3-216ENST00000545663 GAS2O43903 313 aaKnown RBP17.49■□□□□ 0.39
CLSTN3-216ENST00000545663 PAPLNO95428 1278 aa17.49■□□□□ 0.39
CLSTN3-216ENST00000545663 TROAPQ12815 778 aa17.49■□□□□ 0.39
CLSTN3-216ENST00000545663 CCDC6Q16204 474 aa17.49■□□□□ 0.39
CLSTN3-216ENST00000545663 FAM160B1Q5W0V3 765 aa17.49■□□□□ 0.39
CLSTN3-216ENST00000545663 EFCAB12Q6NXP0 572 aa17.49■□□□□ 0.39
CLSTN3-216ENST00000545663 RSPO2Q6UXX9 243 aaPredicted RBP17.49■□□□□ 0.39
CLSTN3-216ENST00000545663 CKAP2LQ8IYA6 745 aa17.49■□□□□ 0.39
CLSTN3-216ENST00000545663 PRKD2Q9BZL6 878 aa17.49■□□□□ 0.39
CLSTN3-216ENST00000545663 ZNF302Q9NR11 478 aa17.49■□□□□ 0.39
CLSTN3-216ENST00000545663 DOCK6Q96HP0 2047 aa17.48■□□□□ 0.39
CLSTN3-216ENST00000545663 KCNK5O95279 499 aa17.48■□□□□ 0.39
CLSTN3-216ENST00000545663 URODP06132 367 aa17.48■□□□□ 0.39
CLSTN3-216ENST00000545663 NRLP54845 237 aa17.48■□□□□ 0.39
CLSTN3-216ENST00000545663 GRASPQ7Z6J2 395 aaPredicted RBP17.48■□□□□ 0.39
CLSTN3-216ENST00000545663 LINC01465Q8N7H1 131 aa17.48■□□□□ 0.39
CLSTN3-216ENST00000545663 B3GALT6Q96L58 329 aa17.48■□□□□ 0.39
CLSTN3-216ENST00000545663 NELL2Q99435 816 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms