RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 RAD51CO43502 376 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 KRT1P04264 644 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 KRT15P19012 456 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 CHRNA5P30532 468 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 BAG6P46379 1132 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 BFSP1Q12934 665 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 IFT88Q13099 833 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 ZC2HC1CQ53FD0 456 aaPredicted RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 ZNF662Q6ZS27 426 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 VSIG1Q86XK7 387 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 CCHCR1Q8TD31 782 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 ZNF526Q8TF50 670 aaPredicted RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 GLG1Q92896 1179 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 VCX3AQ9NNX9 186 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 ZNF233A6NK53 670 aa6.21□□□□□ -1.41
VPS50-220ENST00000544910 FTLP02792 175 aaPredicted RBP6.21□□□□□ -1.41
VPS50-220ENST00000544910 MUTP22033 750 aa6.21□□□□□ -1.41
VPS50-220ENST00000544910 KLRC1P26715 233 aa6.21□□□□□ -1.41
VPS50-220ENST00000544910 TFDP1Q14186 410 aa6.21□□□□□ -1.41
VPS50-220ENST00000544910 BRDTQ58F21 947 aaPredicted RBP6.21□□□□□ -1.41
VPS50-220ENST00000544910 SLFN12LQ6IEE8 588 aa6.21□□□□□ -1.41
VPS50-220ENST00000544910 RSBN1LQ6PCB5 846 aaPredicted RBP6.21□□□□□ -1.41
VPS50-220ENST00000544910 NCAPG2Q86XI2 1143 aa6.21□□□□□ -1.41
VPS50-220ENST00000544910 MCUR1Q96AQ8 359 aa6.21□□□□□ -1.41
VPS50-220ENST00000544910 ANKRD36BP1Q96IX9 119 aa6.21□□□□□ -1.41
VPS50-220ENST00000544910 RMDN3Q96TC7 470 aa6.21□□□□□ -1.41
VPS50-220ENST00000544910 DDX4Q9NQI0 724 aaKnown RBP6.21□□□□□ -1.41
VPS50-220ENST00000544910 TRPC6Q9Y210 931 aa6.21□□□□□ -1.41
VPS50-220ENST00000544910 MYH15Q9Y2K3 1946 aa6.21□□□□□ -1.41
VPS50-220ENST00000544910 EVI5O60447 810 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 RHBDL3P58872 404 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 SNRPFP62306 86 aaKnown RBP6.21□□□□□ -1.42
VPS50-220ENST00000544910 PPP2R2AP63151 447 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 ZNF211Q13398 564 aaPredicted RBP6.21□□□□□ -1.42
VPS50-220ENST00000544910 KRT39Q6A163 491 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 GADL1Q6ZQY3 521 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 GPD1LQ8N335 351 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 CCDC63Q8NA47 563 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 SLC7A3Q8WY07 619 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 MXRA8Q9BRK3 442 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 ACTR5Q9H9F9 607 aaPredicted RBP6.21□□□□□ -1.42
VPS50-220ENST00000544910 KIAA1586Q9HCI6 787 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 ZNF277Q9NRM2 450 aaPredicted RBP6.21□□□□□ -1.42
VPS50-220ENST00000544910 SUCLA2Q9P2R7 463 aaPredicted RBP6.21□□□□□ -1.42
VPS50-220ENST00000544910 L1RE1Q9UN81 338 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 SIK3Q9Y2K2 1263 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 SCINQ9Y6U3 715 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 DENND3A2RUS2 1198 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 TMEM191BP0C7N4 346 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 TMEM253P0C7T8 217 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 VPS41P49754 854 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 GALCP54803 685 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 SLC12A3P55017 1021 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 MUM1L1Q5H9M0 696 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 GJB7Q6PEY0 223 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 NLRP14Q86W24 1093 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 EXOC8Q8IYI6 725 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 TPCN2Q8NHX9 752 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 RAB3IL1Q8TBN0 382 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 MSTO1Q9BUK6 570 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 LACRTQ9GZZ8 138 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 ISCUQ9H1K1 167 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 CNOT8Q9UFF9 292 aaKnown RBP6.21□□□□□ -1.42
VPS50-220ENST00000544910 LCMT1Q9UIC8 334 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 FBXL5Q9UKA1 691 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 PJA2O43164 708 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 PHF2O75151 1096 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 LDHAP00338 332 aaKnown RBP6.21□□□□□ -1.42
VPS50-220ENST00000544910 FKBP1AP62942 108 aaKnown RBP6.21□□□□□ -1.42
VPS50-220ENST00000544910 NFIAQ12857 509 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 DBN1Q16643 649 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 MUM1Q2TAK8 710 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 MEI1Q5TIA1 1274 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 RINT1Q6NUQ1 792 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 KSR1Q8IVT5 923 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 PRPF38AQ8NAV1 312 aaKnown RBP6.21□□□□□ -1.42
VPS50-220ENST00000544910 MCPH1Q8NEM0 835 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 RNPC3Q96LT9 517 aaKnown RBP6.21□□□□□ -1.42
VPS50-220ENST00000544910 MTRQ99707 1265 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 POLR3FQ9H1D9 316 aaPredicted RBP6.21□□□□□ -1.42
VPS50-220ENST00000544910 EHD2Q9NZN4 543 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 SNX24Q9Y343 169 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 CSADQ9Y600 493 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 NUP98P52948 1817 aa6.21□□□□□ -1.42
VPS50-220ENST00000544910 RASGRF2O14827 1237 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 WDR46O15213 610 aaKnown RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 EIF3HO15372 352 aaKnown RBP eCLIP6.2□□□□□ -1.42
VPS50-220ENST00000544910 CCDC62Q6P9F0 684 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 HAUS6Q7Z4H7 955 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 METTL13Q8N6R0 699 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 FAM151AQ8WW52 585 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 CASKIN2Q8WXE0 1202 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 PAGR1Q9BTK6 254 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 VCPKMTQ9H867 229 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 THEGQ9P2T0 379 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 BCAP29Q9UHQ4 241 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 BCS1LQ9Y276 419 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 RSPH10B2B2RC85 870 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 P4HA2O15460 535 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 RSPH10BP0C881 870 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms