RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 ZNF280BQ86YH2 543 aa14.47□□□□□ -0.09
USP28-212ENST00000544750 SIX5Q8N196 739 aa14.47□□□□□ -0.09
USP28-212ENST00000544750 NLRP7Q8WX94 980 aa14.47□□□□□ -0.09
USP28-212ENST00000544750 TCEANC2Q96MN5 208 aa14.47□□□□□ -0.09
USP28-212ENST00000544750 ESYT1Q9BSJ8 1104 aa14.47□□□□□ -0.09
USP28-212ENST00000544750 IGSF9Q9P2J2 1179 aa14.47□□□□□ -0.09
USP28-212ENST00000544750 SAMM50Q9Y512 469 aa14.47□□□□□ -0.09
USP28-212ENST00000544750 MYH15Q9Y2K3 1946 aa14.47□□□□□ -0.09
USP28-212ENST00000544750 GOLGA8AA7E2F4 631 aa14.46□□□□□ -0.09
USP28-212ENST00000544750 GOLGA8BA8MQT2 603 aa14.46□□□□□ -0.09
USP28-212ENST00000544750 MSH4O15457 936 aa14.46□□□□□ -0.09
USP28-212ENST00000544750 PAPLNO95428 1278 aa14.46□□□□□ -0.09
USP28-212ENST00000544750 CNPP09543 421 aaKnown RBP14.46□□□□□ -0.09
USP28-212ENST00000544750 RCAN1P53805 252 aa14.46□□□□□ -0.09
USP28-212ENST00000544750 CDC42EP1Q00587 391 aa14.46□□□□□ -0.09
USP28-212ENST00000544750 REXO1Q8N1G1 1221 aaKnown RBP14.46□□□□□ -0.09
USP28-212ENST00000544750 CMASQ8NFW8 434 aaPredicted RBP14.46□□□□□ -0.09
USP28-212ENST00000544750 RMDN1Q96DB5 314 aa14.46□□□□□ -0.09
USP28-212ENST00000544750 CCDC136Q96JN2 1154 aa14.46□□□□□ -0.09
USP28-212ENST00000544750 NIFKQ9BYG3 293 aaKnown RBP14.46□□□□□ -0.09
USP28-212ENST00000544750 RHOBTB2Q9BYZ6 727 aa14.46□□□□□ -0.09
USP28-212ENST00000544750 GCOM2Q9BZD3 368 aaPredicted RBP14.46□□□□□ -0.09
USP28-212ENST00000544750 SEMA4AQ9H3S1 761 aa14.46□□□□□ -0.09
USP28-212ENST00000544750 FAM105AQ9NUU6 356 aa14.46□□□□□ -0.09
USP28-212ENST00000544750 WNT16Q9UBV4 365 aa14.46□□□□□ -0.09
USP28-212ENST00000544750 CACNA1BQ00975 2339 aa14.46□□□□□ -0.1
USP28-212ENST00000544750 PATJQ8NI35 1801 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 A0A087WZ62 844 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 MED19A0JLT2 244 aaPredicted RBP14.45□□□□□ -0.1
USP28-212ENST00000544750 DDHD2O94830 711 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 EFEMP2O95967 443 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 LMNAP02545 664 aaKnown RBP14.45□□□□□ -0.1
USP28-212ENST00000544750 SKIP12755 728 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 ADD1P35611 737 aaKnown RBP14.45□□□□□ -0.1
USP28-212ENST00000544750 LONRF3Q496Y0 759 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 TWF2Q6IBS0 349 aaKnown RBP14.45□□□□□ -0.1
USP28-212ENST00000544750 GLB1LQ6UWU2 654 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 B3GNT9Q6UX72 402 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 AGMOQ6ZNB7 445 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 DHX32Q7L7V1 743 aaKnown RBP14.45□□□□□ -0.1
USP28-212ENST00000544750 TMEM87AQ8NBN3 555 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 SLC5A5Q92911 643 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 SCLT1Q96NL6 688 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 RIT2Q99578 217 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 FDXACB1Q9BRP7 624 aaPredicted RBP14.45□□□□□ -0.1
USP28-212ENST00000544750 TCEAL9Q9UHQ7 104 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 FBXL21Q9UKT6 434 aa14.45□□□□□ -0.1
USP28-212ENST00000544750 NCOR2Q9Y618 2525 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 ARID2Q68CP9 1835 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 KLF18A0A0U1RQI7 1052 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 NEFLP07196 543 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 CENPBP07199 599 aaPredicted RBP14.44□□□□□ -0.1
USP28-212ENST00000544750 SFPQP23246 707 aaKnown RBP eCLIP14.44□□□□□ -0.1
USP28-212ENST00000544750 KLRC2P26717 231 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 SFNP31947 248 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 RAB27AP51159 221 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 AFF1P51825 1210 aaKnown RBP14.44□□□□□ -0.1
USP28-212ENST00000544750 ADCK5Q3MIX3 580 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 TSGA10IPQ3SY00 556 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 MRPL10Q7Z7H8 261 aaKnown RBP14.44□□□□□ -0.1
USP28-212ENST00000544750 ZNF410Q86VK4 478 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 RNF168Q8IYW5 571 aaPredicted RBP14.44□□□□□ -0.1
USP28-212ENST00000544750 RSAD2Q8WXG1 361 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 EMILIN2Q9BXX0 1053 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 UNC45AQ9H3U1 944 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 C6orf50Q9HD87 102 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 WDR6Q9NNW5 1121 aaKnown RBP14.44□□□□□ -0.1
USP28-212ENST00000544750 DLGAP2Q9P1A6 1054 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 EPS15L1Q9UBC2 864 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 STK39Q9UEW8 545 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 PIN4Q9Y237 131 aaKnown RBP14.44□□□□□ -0.1
USP28-212ENST00000544750 INPP5FQ9Y2H2 1132 aa14.44□□□□□ -0.1
USP28-212ENST00000544750 TMEM150BA6NC51 233 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 MAFO75444 373 aaPredicted RBP14.43□□□□□ -0.1
USP28-212ENST00000544750 PSMD10O75832 226 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 JAK3P52333 1124 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 RNASELQ05823 741 aaKnown RBP14.43□□□□□ -0.1
USP28-212ENST00000544750 MTERF2Q49AM1 385 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 XKR3Q5GH77 459 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 BMP2KLQ5H9B9 411 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 CYP26C1Q6V0L0 522 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 RASEFQ8IZ41 740 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 SLC44A3Q8N4M1 653 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 RDM1Q8NG50 284 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 GJA10Q969M2 543 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 TMEM175Q9BSA9 504 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 INO80BQ9C086 356 aaPredicted RBP14.43□□□□□ -0.1
USP28-212ENST00000544750 GBP3Q9H0R5 595 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 IFT122Q9HBG6 1241 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 ANO2Q9NQ90 1003 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 MAN1C1Q9NR34 630 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 R4GN57 208 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 NID2Q14112 1375 aa14.43□□□□□ -0.1
USP28-212ENST00000544750 NRP1O14786 923 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 PRPF3O43395 683 aaKnown RBP14.42□□□□□ -0.1
USP28-212ENST00000544750 CHMP2AO43633 222 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 GAS7O60861 476 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 SOD2P04179 222 aa14.42□□□□□ -0.1
USP28-212ENST00000544750 SSBP05455 408 aaKnown RBP eCLIP14.42□□□□□ -0.1
USP28-212ENST00000544750 CFHP08603 1231 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms