RNA–Protein interactions for RNA: ENST00000544257.5

RIMKLB-212, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 1 (best)

Gene RIMKLB, Length 1,589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-212ENST00000544257 ARHGEF35A5YM69 484 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 RNF223E7ERA6 249 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 RPS6KA5O75582 802 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 S1PR4O95977 384 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 DARSP14868 501 aaKnown RBP10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 ATP2A2P16615 1042 aaKnown RBP10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 CYP11B2P19099 503 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 CDC25AP30304 524 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 ARL2P36404 184 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 FXR1P51114 621 aaKnown RBP eCLIP10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 STK38Q15208 465 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 TMEM119Q4V9L6 283 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 CABP7Q86V35 215 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 RHPN2Q8IUC4 686 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 KRI1Q8N9T8 703 aaKnown RBP10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 TMEM40Q8WWA1 233 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 CALML4Q96GE6 196 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 PNMA5Q96PV4 448 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 GCOM2Q9BZD3 368 aaPredicted RBP10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 INO80BQ9C086 356 aaPredicted RBP10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 PADI3Q9ULW8 664 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 GINS2Q9Y248 185 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 ZDHHC9Q9Y397 364 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 NOC2LQ9Y3T9 749 aaKnown RBP10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 ATP6V1DQ9Y5K8 247 aa10.75□□□□□ -0.69
RIMKLB-212ENST00000544257 TMEM265A0A087WTH1 108 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 SOX1O00570 391 aaPredicted RBP10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 SPTLC2O15270 562 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 USO1O60763 962 aaKnown RBP10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 AMHP03971 560 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 MARCKSP29966 332 aaPredicted RBP10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 CD52P31358 61 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 DDIT3P35638 169 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 GRIN1Q05586 938 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 LAMTOR4Q0VGL1 99 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 GRB10Q13322 594 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 PCBP1Q15365 356 aaKnown RBP eCLIP10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 RAB30Q15771 203 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 FAM228AQ86W67 206 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 KCNG4Q8TDN1 519 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 PRPF31Q8WWY3 499 aaKnown RBP10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 TMEM143Q96AN5 459 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 CDK5RAP3Q96JB5 506 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 TIPINQ9BVW5 301 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 NFKBIZQ9BYH8 718 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 CSRNP2Q9H175 543 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 BHMT2Q9H2M3 363 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 KCND2Q9NZV8 630 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 ST3GAL5Q9UNP4 418 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 LAMA3Q16787 3333 aa10.74□□□□□ -0.69
RIMKLB-212ENST00000544257 A0A087WWV3 80 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 A0A087WZ62 844 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 SFPQP23246 707 aaKnown RBP eCLIP10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 TXLNAP40222 546 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 NUCB2P80303 420 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 CEBPZQ03701 1054 aaKnown RBP10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 TFDP1Q14186 410 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 FOXD4L5Q5VV16 416 aaPredicted RBP10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 FAM109BQ6ICB4 259 aaPredicted RBP10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 SRGAP1Q7Z6B7 1085 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 HERC6Q8IVU3 1022 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 FOXD4L4Q8WXT5 416 aaPredicted RBP10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 SCLT1Q96NL6 688 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 PPP1R16BQ96T49 567 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 FDXACB1Q9BRP7 624 aaPredicted RBP10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 TMX1Q9H3N1 280 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 IFT122Q9HBG6 1241 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 C1orf112Q9NSG2 853 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 PCDHA11Q9Y5I1 949 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 PTPRSQ13332 1948 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 COL4A6Q14031 1691 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 E9PMD0 336 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 ENPP3O14638 875 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 GJB5O95377 273 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 GUCY2CP25092 1073 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 PHKA2P46019 1235 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 PTENP60484 403 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 DEFB103AP81534 67 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 NFX1Q12986 1120 aaKnown RBP10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 KCNK18Q7Z418 384 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 SYT2Q8N9I0 419 aaPredicted RBP10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 SYMPKQ92797 1274 aaKnown RBP10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 KIFAP3Q92845 792 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 TOP1MTQ969P6 601 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 NLRP4Q96MN2 994 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 PBX4Q9BYU1 374 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 POLR3FQ9H1D9 316 aaPredicted RBP10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 CHST12Q9NRB3 414 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 TFIP11Q9UBB9 837 aaKnown RBP10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 CCDC39Q9UFE4 941 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 RCOR1Q9UKL0 485 aa10.73□□□□□ -0.69
RIMKLB-212ENST00000544257 CUTAO60888 179 aa10.72□□□□□ -0.69
RIMKLB-212ENST00000544257 GLRA2P23416 452 aa10.72□□□□□ -0.69
RIMKLB-212ENST00000544257 ANP32AP39687 249 aaKnown RBP10.72□□□□□ -0.69
RIMKLB-212ENST00000544257 SLC12A3P55017 1021 aa10.72□□□□□ -0.69
RIMKLB-212ENST00000544257 KRT85P78386 507 aa10.72□□□□□ -0.69
RIMKLB-212ENST00000544257 DNM1Q05193 864 aaKnown RBP10.72□□□□□ -0.69
RIMKLB-212ENST00000544257 CAPSQ13938 189 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms