RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 BRD3Q15059 726 aa4.74□□□□□ -1.65
SCFD1-207ENST00000544052 ANO4Q32M45 955 aa4.74□□□□□ -1.65
SCFD1-207ENST00000544052 PGS1Q32NB8 556 aa4.74□□□□□ -1.65
SCFD1-207ENST00000544052 LCE1DQ5T752 114 aa4.74□□□□□ -1.65
SCFD1-207ENST00000544052 OVCH2Q7RTZ1 564 aa4.74□□□□□ -1.65
SCFD1-207ENST00000544052 GLB1L3Q8NCI6 653 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-207ENST00000544052 CPA5Q8WXQ8 436 aa4.74□□□□□ -1.65
SCFD1-207ENST00000544052 MVB12AQ96EY5 273 aa4.74□□□□□ -1.65
SCFD1-207ENST00000544052 LIN37Q96GY3 246 aaPredicted RBP4.74□□□□□ -1.65
SCFD1-207ENST00000544052 SOX7Q9BT81 388 aa4.74□□□□□ -1.65
SCFD1-207ENST00000544052 PDS5BQ9NTI5 1447 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 CFTRP13569 1480 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 ZNF503-AS2A6NEH8 195 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 TPP1O14773 563 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 GSPT1P15170 499 aaKnown RBP4.73□□□□□ -1.65
SCFD1-207ENST00000544052 SLC16A1P53985 500 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 ITGA1P56199 1179 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 JAG1P78504 1218 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 SAFBQ15424 915 aaKnown RBP eCLIP4.73□□□□□ -1.65
SCFD1-207ENST00000544052 CHST15Q7LFX5 561 aaPredicted RBP4.73□□□□□ -1.65
SCFD1-207ENST00000544052 LDHDQ86WU2 507 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 OR2I1PQ8NGU4 316 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 GORASP1Q9BQQ3 440 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 MYH16Q9H6N6 1097 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 NGRNQ9NPE2 291 aaKnown RBP4.73□□□□□ -1.65
SCFD1-207ENST00000544052 KCMF1Q9P0J7 381 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 USP25Q9UHP3 1055 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 SCOCQ9UIL1 159 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 PTPN22Q9Y2R2 807 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 IRS2Q9Y4H2 1338 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 ARID1BQ8NFD5 2236 aaPredicted RBP4.73□□□□□ -1.65
SCFD1-207ENST00000544052 URB2Q14146 1524 aaKnown RBP4.73□□□□□ -1.65
SCFD1-207ENST00000544052 MYOCOSA0A1B0GUC4 107 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.73□□□□□ -1.65
SCFD1-207ENST00000544052 CYP2C8P10632 490 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 PPP3CAQ08209 521 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 IL10RAQ13651 578 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 STILQ15468 1287 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 FAM156AQ8NDB6 213 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 OR5AN1Q8NGI8 311 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 WDR48Q8TAF3 677 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 MORC4Q8TE76 937 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 FATE1Q969F0 183 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 HIST1H2AHQ96KK5 128 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 HIST1H2AJQ99878 128 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 SGPP1Q9BX95 441 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 CNTD2Q9H8S5 307 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 DDX21Q9NR30 783 aaKnown RBP eCLIP4.73□□□□□ -1.65
SCFD1-207ENST00000544052 PCDHA5Q9Y5H7 936 aa4.73□□□□□ -1.65
SCFD1-207ENST00000544052 FANCD2Q9BXW9 1451 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 N4BP3O15049 544 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 C8AP07357 584 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 MCAMP43121 646 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 MUM1L1Q5H9M0 696 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 GORABQ5T7V8 394 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 MPZL3Q6UWV2 235 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 COL23A1Q86Y22 540 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-207ENST00000544052 BCL6BQ8N143 479 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-207ENST00000544052 SAMD3Q8N6K7 520 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 PARD3BQ8TEW8 1205 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 RSAD2Q8WXG1 361 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 TTC17Q96AE7 1141 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 C1GALT1C1Q96EU7 318 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 NOX5Q96PH1 765 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 DIRC2Q96SL1 478 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 PCGF6Q9BYE7 350 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 KCND1Q9NSA2 647 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 SIRT5Q9NXA8 310 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 DNAI1Q9UI46 699 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 CDC42EP3Q9UKI2 254 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 SYNPO2Q9UMS6 1093 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 PCDHA13Q9Y5I0 950 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 CEP164Q9UPV0 1460 aa4.72□□□□□ -1.65
SCFD1-207ENST00000544052 PMM2O15305 246 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 LDHAP00338 332 aaKnown RBP4.71□□□□□ -1.65
SCFD1-207ENST00000544052 MYL3P08590 195 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 RHCEP18577 417 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 CDR1P51861 262 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 RHDQ02161 417 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 CD69Q07108 199 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 MGAT5Q09328 741 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 NFATC3Q12968 1075 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 PICALMQ13492 652 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 OLFML2BQ68BL8 750 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 LMBR1LQ6UX01 489 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 BTNL9Q6UXG8 535 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 CCDC149Q6ZUS6 474 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 BMP8AQ7Z5Y6 402 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 KAT5Q92993 513 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 DYDC2Q96IM9 177 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 FAM193BQ96PV7 902 aaPredicted RBP4.71□□□□□ -1.65
SCFD1-207ENST00000544052 TMEM209Q96SK2 561 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 LRFN3Q9BTN0 628 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 HAPLN2Q9GZV7 340 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 CROTQ9UKG9 612 aa4.71□□□□□ -1.65
SCFD1-207ENST00000544052 HRKO00198 91 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 SEC24DO94855 1032 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-207ENST00000544052 UBXN7O94888 489 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 PAPLNO95428 1278 aa4.71□□□□□ -1.66
SCFD1-207ENST00000544052 IFIT2P09913 472 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms