RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 HOXA11P31270 313 aaPredicted RBP24.13■■□□□ 1.45
OTUB1-212ENST00000543988 STK38Q15208 465 aa24.13■■□□□ 1.45
OTUB1-212ENST00000543988 CDCA2Q69YH5 1023 aaPredicted RBP24.13■■□□□ 1.45
OTUB1-212ENST00000543988 RINT1Q6NUQ1 792 aa24.13■■□□□ 1.45
OTUB1-212ENST00000543988 CMTR2Q8IYT2 770 aaKnown RBP24.13■■□□□ 1.45
OTUB1-212ENST00000543988 FIBCD1Q8N539 461 aa24.13■■□□□ 1.45
OTUB1-212ENST00000543988 RNF169Q8NCN4 708 aa24.13■■□□□ 1.45
OTUB1-212ENST00000543988 LINC00301Q8NCQ3 95 aa24.13■■□□□ 1.45
OTUB1-212ENST00000543988 RASSF8Q8NHQ8 419 aa24.13■■□□□ 1.45
OTUB1-212ENST00000543988 KIFAP3Q92845 792 aa24.13■■□□□ 1.45
OTUB1-212ENST00000543988 EPSTI1Q96J88 318 aa24.13■■□□□ 1.45
OTUB1-212ENST00000543988 GAS2L1Q99501 681 aaPredicted RBP24.13■■□□□ 1.45
OTUB1-212ENST00000543988 ELAC1Q9H777 363 aaKnown RBP24.13■■□□□ 1.45
OTUB1-212ENST00000543988 RNF19AQ9NV58 838 aa24.13■■□□□ 1.45
OTUB1-212ENST00000543988 RNF216Q9NWF9 866 aaPredicted RBP24.13■■□□□ 1.45
OTUB1-212ENST00000543988 A0A0U1RQF3 1178 aa24.12■■□□□ 1.45
OTUB1-212ENST00000543988 ERLIN2O94905 339 aa24.12■■□□□ 1.45
OTUB1-212ENST00000543988 LINC00271P0C7V0 271 aa24.12■■□□□ 1.45
OTUB1-212ENST00000543988 SLC12A3P55017 1021 aa24.12■■□□□ 1.45
OTUB1-212ENST00000543988 AMHR2Q16671 573 aa24.12■■□□□ 1.45
OTUB1-212ENST00000543988 C1orf186Q6ZWK4 172 aa24.12■■□□□ 1.45
OTUB1-212ENST00000543988 ZNF598Q86UK7 904 aaKnown RBP24.12■■□□□ 1.45
OTUB1-212ENST00000543988 DAW1Q8N136 415 aa24.12■■□□□ 1.45
OTUB1-212ENST00000543988 KRI1Q8N9T8 703 aaKnown RBP24.12■■□□□ 1.45
OTUB1-212ENST00000543988 SYMPKQ92797 1274 aaKnown RBP24.12■■□□□ 1.45
OTUB1-212ENST00000543988 TRAIPQ9BWF2 469 aa24.12■■□□□ 1.45
OTUB1-212ENST00000543988 CCSER1Q9C0I3 900 aa24.12■■□□□ 1.45
OTUB1-212ENST00000543988 MRPL42Q9Y6G3 142 aaKnown RBP24.12■■□□□ 1.45
OTUB1-212ENST00000543988 HIP1RO75146 1068 aa24.11■■□□□ 1.45
OTUB1-212ENST00000543988 BRD1O95696 1058 aa24.11■■□□□ 1.45
OTUB1-212ENST00000543988 MAPK7Q13164 816 aa24.11■■□□□ 1.45
OTUB1-212ENST00000543988 SYT2Q8N9I0 419 aaPredicted RBP24.11■■□□□ 1.45
OTUB1-212ENST00000543988 GDPD5Q8WTR4 605 aa24.11■■□□□ 1.45
OTUB1-212ENST00000543988 KIFC3Q9BVG8 833 aa24.11■■□□□ 1.45
OTUB1-212ENST00000543988 BLOC1S4Q9NUP1 217 aa24.11■■□□□ 1.45
OTUB1-212ENST00000543988 DAXXQ9UER7 740 aaPredicted RBP24.11■■□□□ 1.45
OTUB1-212ENST00000543988 ZDHHC9Q9Y397 364 aa24.11■■□□□ 1.45
OTUB1-212ENST00000543988 TBKBP1A7MCY6 615 aa24.1■■□□□ 1.45
OTUB1-212ENST00000543988 B4GALT5O43286 388 aa24.1■■□□□ 1.45
OTUB1-212ENST00000543988 YEATS4O95619 227 aa24.1■■□□□ 1.45
OTUB1-212ENST00000543988 GUCY2CP25092 1073 aa24.1■■□□□ 1.45
OTUB1-212ENST00000543988 NAMPTP43490 491 aa24.1■■□□□ 1.45
OTUB1-212ENST00000543988 PPP2R5AQ15172 486 aa24.1■■□□□ 1.45
OTUB1-212ENST00000543988 PCBP1Q15365 356 aaKnown RBP eCLIP24.1■■□□□ 1.454e-25■■■■□ 22.3
OTUB1-212ENST00000543988 EPC2Q52LR7 807 aa24.1■■□□□ 1.45
OTUB1-212ENST00000543988 ZBTB8OSQ8IWT0 167 aa24.1■■□□□ 1.45
OTUB1-212ENST00000543988 FBXO22Q8NEZ5 403 aa24.1■■□□□ 1.45
OTUB1-212ENST00000543988 FAM105AQ9NUU6 356 aa24.1■■□□□ 1.45
OTUB1-212ENST00000543988 SPTLC2O15270 562 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 LPXNO60711 386 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 IGFBP4P22692 258 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 CTNNB1P35222 781 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 RAB27AP51159 221 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 RAD51AP2Q09MP3 1159 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 CLLU1OSQ5K130 101 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 UBXN11Q5T124 520 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 TMEM192Q8IY95 271 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 DEPTORQ8TB45 409 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 RAD54LQ92698 747 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 CLP1Q92989 425 aaKnown RBP24.09■■□□□ 1.45
OTUB1-212ENST00000543988 CPB2Q96IY4 423 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 IFT74Q96LB3 600 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 DRC1Q96MC2 740 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 SAMD11Q96NU1 681 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 C2orf40Q9H1Z8 148 aa24.09■■□□□ 1.45
OTUB1-212ENST00000543988 GPBP1Q86WP2 473 aa24.08■■□□□ 1.45
OTUB1-212ENST00000543988 MAFAQ8NHW3 353 aaPredicted RBP24.08■■□□□ 1.45
OTUB1-212ENST00000543988 LPPQ93052 612 aa24.08■■□□□ 1.45
OTUB1-212ENST00000543988 TIPINQ9BVW5 301 aa24.08■■□□□ 1.45
OTUB1-212ENST00000543988 TMEM117Q9H0C3 514 aa24.08■■□□□ 1.45
OTUB1-212ENST00000543988 CCDC113Q9H0I3 377 aa24.08■■□□□ 1.45
OTUB1-212ENST00000543988 HCSTQ9UBK5 93 aa24.08■■□□□ 1.45
OTUB1-212ENST00000543988 PCDHB2Q9Y5E7 798 aa24.08■■□□□ 1.45
OTUB1-212ENST00000543988 TRANK1O15050 2925 aa24.08■■□□□ 1.45
OTUB1-212ENST00000543988 NPHP3-ACAD11A0A0J9YXS1 232 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 HOXA2O43364 376 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 PPP6R2O75170 966 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 EOMESO95936 686 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 ARF4P18085 180 aaPredicted RBP24.07■■□□□ 1.44
OTUB1-212ENST00000543988 AXLP30530 894 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 DNM1Q05193 864 aaKnown RBP24.07■■□□□ 1.44
OTUB1-212ENST00000543988 DHX8Q14562 1220 aaKnown RBP24.07■■□□□ 1.44
OTUB1-212ENST00000543988 MCM6Q14566 821 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 LONRF3Q496Y0 759 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 ARSHQ5FYA8 562 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 NOTUMQ6P988 496 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 PPP4R3CPQ6ZMV5 832 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 CCDC51Q96ER9 411 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 CASD1Q96PB1 797 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 FZD8Q9H461 694 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 KCND2Q9NZV8 630 aa24.07■■□□□ 1.44
OTUB1-212ENST00000543988 COL4A4P53420 1690 aaPredicted RBP24.07■■□□□ 1.44
OTUB1-212ENST00000543988 MEIS3P2A8K0S8 358 aa24.06■■□□□ 1.44
OTUB1-212ENST00000543988 ZNF623O75123 536 aa24.06■■□□□ 1.44
OTUB1-212ENST00000543988 SKIP12755 728 aa24.06■■□□□ 1.44
OTUB1-212ENST00000543988 BMPR1AP36894 532 aa24.06■■□□□ 1.44
OTUB1-212ENST00000543988 TXLNAP40222 546 aa24.06■■□□□ 1.44
OTUB1-212ENST00000543988 NPTX2P47972 431 aa24.06■■□□□ 1.44
OTUB1-212ENST00000543988 PEX3P56589 373 aa24.06■■□□□ 1.44
OTUB1-212ENST00000543988 DMP1Q13316 513 aaPredicted RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms