RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 ACCSQ96QU6 501 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 HAUS2Q9NVX0 235 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 PCSK1NQ9UHG2 260 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 GOLGA4Q13439 2230 aaKnown RBP13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 PHBP35232 272 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 DDR1Q08345 913 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 RCSD1Q6JBY9 416 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 DEFB132Q7Z7B7 95 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 CCNYQ8ND76 341 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 RNPC3Q96LT9 517 aaKnown RBP13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 ETNK1Q9HBU6 452 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 L1RE1Q9UN81 338 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 FNDC3AQ9Y2H6 1198 aaKnown RBP13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 SIPA1L3O60292 1781 aaPredicted RBP13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 PVALEFA0A1B0GWK0 134 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 A0A1W2PQC6 194 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 CCDC188H7C350 402 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 PMS2P54278 862 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 SLC8A3P57103 927 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 C2CD6Q53TS8 623 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 PHLDB3Q6NSJ2 640 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 COL23A1Q86Y22 540 aaPredicted RBP13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 KIF2BQ8N4N8 673 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 CNKSR1Q969H4 720 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 FBXO28Q9NVF7 368 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 ZNF446Q9NWS9 450 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 TOM1L1O75674 476 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 MT-ND3P03897 115 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 PMS1P54277 932 aaKnown RBP13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 GALCP54803 685 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 SH2D4BQ5SQS7 431 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 TRIM65Q6PJ69 517 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 TRIM59Q8IWR1 403 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 PLS3P13797 630 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 PPM1FP49593 454 aaPredicted RBP13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 COG7P83436 770 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 DNAJC24Q6P3W2 148 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 CCDC137Q6PK04 289 aaKnown RBP13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 NCAPG2Q86XI2 1143 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 ATP2A3Q93084 1043 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 SCYL1Q96KG9 808 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.87□□□□□ -0.195e-7■■■□□ 16
TUBGCP2-210ENST00000543663 NGRNQ9NPE2 291 aaKnown RBP13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 COL14A1Q05707 1796 aaKnown RBP13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 A0A087X0T9 212 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 DKC1O60832 514 aaKnown RBP eCLIP13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 CRCPO75575 148 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 TRPA1O75762 1119 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 ZRANB2O95218 330 aaKnown RBP eCLIP13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 FAM228BP0C875 321 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 RXRBP28702 533 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 PPP6R3Q5H9R7 873 aaPredicted RBP13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 CYFIP1Q7L576 1253 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 FAM213AQ9BRX8 229 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 ADAM22Q9P0K1 906 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 SSX2IPQ9Y2D8 614 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 ATRNO75882 1429 aa13.87□□□□□ -0.19
TUBGCP2-210ENST00000543663 CFLARO15519 480 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 GAP43P17677 238 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 LSP1P33241 339 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 SLC10A5Q5PT55 438 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 C6orf118Q5T5N4 469 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 TMEM270Q6UE05 265 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 PYROXD1Q8WU10 500 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 SPIRE2Q8WWL2 714 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 SLC7A3Q8WY07 619 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 PACSIN1Q9BY11 444 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 ZNF341Q9BYN7 854 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 LCMT1Q9UIC8 334 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 ADRA2BP18089 450 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 KCNJ6P48051 423 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 MRPS9P82933 396 aaKnown RBP13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 PADI6Q6TGC4 694 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 CFAP36Q96G28 342 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 RTFDC1Q9BY42 306 aaPredicted RBP13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 CAPN9O14815 690 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 ABL1P00519 1130 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 SLMAPQ14BN4 828 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 GNPTABQ3T906 1256 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 CEP128Q6ZU80 1094 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 WDR11Q9BZH6 1224 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 IFT122Q9HBG6 1241 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 STK24Q9Y6E0 443 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 EMSYQ7Z589 1322 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 DDTLA6NHG4 134 aaPredicted RBP13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 MEFVO15553 781 aaPredicted RBP13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 CYP26A1O43174 497 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 ECE1P42892 770 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 LONRF1Q17RB8 773 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 ZNF473Q8WTR7 871 aaKnown RBP13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 HSPH1Q92598 858 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 NUDT12Q9BQG2 462 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 CCSER1Q9C0I3 900 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 DHX36Q9H2U1 1008 aaKnown RBP13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 KLC4Q9NSK0 619 aa13.86□□□□□ -0.19
TUBGCP2-210ENST00000543663 ABCB11O95342 1321 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 UCHL3P15374 230 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 RFC1P35251 1148 aaPredicted RBP13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 SBK1Q52WX2 424 aa13.85□□□□□ -0.19
TUBGCP2-210ENST00000543663 DARS2Q6PI48 645 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms