RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 GPC3P51654 580 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 KIF5AQ12840 1032 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 C17orf99Q6UX52 265 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 NDST4Q9H3R1 872 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 TMEM51Q9NW97 253 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 ANKFY1Q9P2R3 1169 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 TSKSQ9UJT2 592 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 AGO2Q9UKV8 859 aaKnown RBP8.68□□□□□ -1.02
TRIM59-208ENST00000543469 TRIM17Q9Y577 477 aa8.68□□□□□ -1.02
TRIM59-208ENST00000543469 CLTAP09496 248 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 TNNC1P63316 161 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 GRIK4Q16099 956 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 BMT2Q1RMZ1 405 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 GRAMD1CQ8IYS0 662 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 MS4A4AQ96JQ5 239 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 FERMT1Q9BQL6 677 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 TBX20Q9UMR3 447 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 MAFBQ9Y5Q3 323 aaPredicted RBP8.67□□□□□ -1.02
TRIM59-208ENST00000543469 PHIPQ8WWQ0 1821 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 GPR25O00155 361 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 PRR29P0C7W0 189 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 STAG3L1P0CL83 205 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 MCF2P10911 925 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 MCM3P25205 808 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 BRCA1P38398 1863 aaKnown RBP8.67□□□□□ -1.02
TRIM59-208ENST00000543469 ZBED6P86452 979 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 STILQ15468 1287 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 C11orf57Q6ZUT1 292 aaPredicted RBP8.67□□□□□ -1.02
TRIM59-208ENST00000543469 RNF149Q8NC42 400 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 XPO4Q9C0E2 1151 aaKnown RBP8.67□□□□□ -1.02
TRIM59-208ENST00000543469 PORCNQ9H237 461 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 RIPK3Q9Y572 518 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 COL4A5P29400 1685 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 SMIM35A0A1B0GVV1 85 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 RBM47A0AV96 593 aaKnown RBP8.67□□□□□ -1.02
TRIM59-208ENST00000543469 EFCAB14O75071 495 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 POLR2BP30876 1174 aaKnown RBP8.67□□□□□ -1.02
TRIM59-208ENST00000543469 PNPLA4P41247 253 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 PTPN14Q15678 1187 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 C12orf56Q8IXR9 622 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 CCDC170Q8IYT3 715 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 GOLGA6L1Q8N7Z2 621 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 PANX2Q96RD6 677 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 UIMC1Q96RL1 719 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 GPR20Q99678 358 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 FAM124BQ9H5Z6 455 aaPredicted RBP8.67□□□□□ -1.02
TRIM59-208ENST00000543469 TRAF3IP3Q9Y228 551 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 GINS2Q9Y248 185 aa8.67□□□□□ -1.02
TRIM59-208ENST00000543469 SORBS3O60504 671 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 GRK4P32298 578 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 VAMP7P51809 220 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 MRPS9P82933 396 aaKnown RBP8.66□□□□□ -1.02
TRIM59-208ENST00000543469 RAPGEF1Q13905 1077 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 CCDC144BQ3MJ40 725 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 KRT39Q6A163 491 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 CCDC186Q7Z3E2 898 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 SYCE1Q8N0S2 351 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 CAGE1Q8TC20 777 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 FAM49AQ9H0Q0 323 aaPredicted RBP8.66□□□□□ -1.02
TRIM59-208ENST00000543469 IFT122Q9HBG6 1241 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 CEP72Q9P209 647 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 GDAQ9Y2T3 454 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 TRPV2Q9Y5S1 764 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 SKILP12757 684 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 CTCFP49711 727 aaPredicted RBP8.66□□□□□ -1.02
TRIM59-208ENST00000543469 FLT3LGP49771 235 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 NOLC1Q14978 699 aaKnown RBP eCLIP8.66□□□□□ -1.02
TRIM59-208ENST00000543469 CCDC181Q5TID7 509 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 C1orf186Q6ZWK4 172 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 VSTM4Q8IW00 320 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 IPO4Q8TEX9 1081 aaKnown RBP8.66□□□□□ -1.02
TRIM59-208ENST00000543469 GOLGA1Q92805 767 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 ACAP3Q96P50 834 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 SYNCQ9H7C4 482 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 STARD7Q9NQZ5 370 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 BLOC1S4Q9NUP1 217 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 GTPBP10A4D1E9 387 aaKnown RBP8.66□□□□□ -1.02
TRIM59-208ENST00000543469 PTK2Q05397 1052 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 CKAP4Q07065 602 aaKnown RBP8.66□□□□□ -1.02
TRIM59-208ENST00000543469 ATF7IP2Q5U623 682 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 CENPPQ6IPU0 288 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 ZNF720Q7Z2F6 126 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 SLC9A9Q8IVB4 645 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 KIF18AQ8NI77 898 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 CPLX3Q8WVH0 158 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 PASKQ96RG2 1323 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 DNAJC25-GNG10A0A024R161 153 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 TOM1L1O75674 476 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 TFRCP02786 760 aaKnown RBP8.66□□□□□ -1.02
TRIM59-208ENST00000543469 MMP3P08254 477 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 KRT9P35527 623 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 PDE6CP51160 858 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 KLHL30Q0D2K2 578 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 LY6KQ17RY6 165 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 DUOXA2Q1HG44 320 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 SLC35G1Q2M3R5 365 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 TRIM72Q6ZMU5 477 aa8.66□□□□□ -1.02
TRIM59-208ENST00000543469 ARGLU1Q9NWB6 273 aaPredicted RBP8.66□□□□□ -1.02
TRIM59-208ENST00000543469 DDX20Q9UHI6 824 aaKnown RBP8.66□□□□□ -1.02
TRIM59-208ENST00000543469 PUF60Q9UHX1 559 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms