RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TUFT1Q9NNX1 390 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 AGO2Q9UKV8 859 aaKnown RBP7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 RPS6KA5O75582 802 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 TBXAS1P24557 533 aaPredicted RBP7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 DGKDQ16760 1214 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 TMEM270Q6UE05 265 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 PHLDB2Q86SQ0 1253 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 RRAGCQ9HB90 399 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 TACC3Q9Y6A5 838 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 TNS2Q63HR2 1409 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 A8MXQ7 604 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 F8W8V4 182 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 RGS16O15492 202 aaPredicted RBP7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 AP1G2O75843 785 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 SDE2Q6IQ49 451 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 BZW1Q7L1Q6 419 aaKnown RBP7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 IRAK4Q9NWZ3 460 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 ERAP1Q9NZ08 941 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 ADAM22Q9P0K1 906 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 STAP1Q9ULZ2 295 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 USP32Q8NFA0 1604 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 PXDNLA1KZ92 1463 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 EYA4O95677 639 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 SERPING1P05155 500 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 CYP2C9P11712 490 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 BLVRAP53004 296 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 PDE1BQ01064 536 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 DUOXA2Q1HG44 320 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 SGO2Q562F6 1265 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 GLB1LQ6UWU2 654 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 C17orf53Q8N3J3 647 aaPredicted RBP7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 RGL1Q9NZL6 768 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 DNAJC12Q9UKB3 198 aa7.39□□□□□ -1.23
SRGAP1-206ENST00000543397 STXBP3O00186 592 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 PSMA2P25787 234 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 CTNNA1P35221 906 aaKnown RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 CYP27A1Q02318 531 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 RBL2Q08999 1139 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 LAMC2Q13753 1193 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 PPP6R3Q5H9R7 873 aaPredicted RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 C10orf76Q5T2E6 689 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 XRRA1Q6P2D8 792 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 DARS2Q6PI48 645 aaKnown RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 C11orf57Q6ZUT1 292 aaPredicted RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 PLEKHH3Q7Z736 793 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 SMAP1Q8IYB5 467 aaPredicted RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 SAAL1Q96ER3 474 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 TTC25Q96NG3 672 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 TIPINQ9BVW5 301 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 FAM217BQ9NTX9 383 aaPredicted RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 SH3BP1Q9Y3L3 701 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 BCORL1Q5H9F3 1711 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 POLRMTO00411 1230 aaKnown RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 VAMP7P51809 220 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 GUCY2FP51841 1108 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 AP3M2P53677 418 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 BACE1P56817 501 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 ETF1P62495 437 aaKnown RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 NFIAQ12857 509 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 NUDT18Q6ZVK8 323 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 YAF2Q8IY57 180 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 GPD1LQ8N335 351 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 AGBL1Q96MI9 1066 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 FAM50BQ9Y247 325 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 NEMP1O14524 444 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 RFX5P48382 616 aaPredicted RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 LLGL1Q15334 1064 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 TSGA10IPQ3SY00 556 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 KRT39Q6A163 491 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 ALKBH5Q6P6C2 394 aaKnown RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 ZNF467Q7Z7K2 595 aaPredicted RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 NOP9Q86U38 636 aaKnown RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 GIMAP7Q8NHV1 300 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 TNIP3Q96KP6 325 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 CFAP57Q96MR6 1250 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 FHDC1Q9C0D6 1143 aaPredicted RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 HPCAL4Q9UM19 191 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 PTPN22Q9Y2R2 807 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 PP2D1A8MPX8 630 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 TBX3O15119 743 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 TADA2AO75478 443 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 RPS6P62753 249 aaKnown RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 PDIA5Q14554 519 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 TCP11X2Q5H9J9 407 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 LRRC8AQ8IWT6 810 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 GPC2Q8N158 579 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 MROH8Q9H579 483 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 UBE4BO95155 1302 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 PDS5AQ29RF7 1337 aaKnown RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 COL5A2P05997 1499 aaPredicted RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 DCDC2CA8MYV0 355 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 KIF3CO14782 793 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 ZBED1O96006 694 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 EIF4A3P38919 411 aaKnown RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 BASP1P80723 227 aaKnown RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 NBPF12Q5TAG4 269 aaPredicted RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 ANKRD20A3Q5VUR7 823 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 STOX1Q6ZVD7 989 aa7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 MYLK4Q86YV6 388 aaPredicted RBP7.38□□□□□ -1.23
SRGAP1-206ENST00000543397 ARRDC4Q8NCT1 418 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms