RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 BMPR1AP36894 532 aa12.79□□□□□ -0.36
C2CD3-217ENST00000542452 PHKA2P46019 1235 aa12.79□□□□□ -0.36
C2CD3-217ENST00000542452 GPM6BQ13491 265 aa12.79□□□□□ -0.36
C2CD3-217ENST00000542452 KRT79Q5XKE5 535 aa12.79□□□□□ -0.36
C2CD3-217ENST00000542452 ARL6IP4Q66PJ3 421 aaKnown RBP12.79□□□□□ -0.36
C2CD3-217ENST00000542452 CDCA2Q69YH5 1023 aaPredicted RBP12.79□□□□□ -0.36
C2CD3-217ENST00000542452 LRRC55Q6ZSA7 311 aa12.79□□□□□ -0.36
C2CD3-217ENST00000542452 FAM43BQ6ZT52 329 aaPredicted RBP12.79□□□□□ -0.36
C2CD3-217ENST00000542452 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.79□□□□□ -0.36
C2CD3-217ENST00000542452 RNF169Q8NCN4 708 aa12.79□□□□□ -0.36
C2CD3-217ENST00000542452 HELQQ8TDG4 1101 aa12.79□□□□□ -0.36
C2CD3-217ENST00000542452 CPB2Q96IY4 423 aa12.79□□□□□ -0.36
C2CD3-217ENST00000542452 TRAIPQ9BWF2 469 aa12.79□□□□□ -0.36
C2CD3-217ENST00000542452 INO80BQ9C086 356 aaPredicted RBP12.79□□□□□ -0.36
C2CD3-217ENST00000542452 CHST12Q9NRB3 414 aa12.79□□□□□ -0.36
C2CD3-217ENST00000542452 TTLL13PA6NNM8 815 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 GTPBP6O43824 516 aaPredicted RBP12.78□□□□□ -0.36
C2CD3-217ENST00000542452 EYA4O95677 639 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 DNAJB1P25685 340 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 POU5F1BQ06416 359 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 MAPK7Q13164 816 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 CAMK1Q14012 370 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 MXD4Q14582 209 aaPredicted RBP12.78□□□□□ -0.36
C2CD3-217ENST00000542452 LONRF3Q496Y0 759 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 TWF2Q6IBS0 349 aaKnown RBP12.78□□□□□ -0.36
C2CD3-217ENST00000542452 DAW1Q8N136 415 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 MCPH1Q8NEM0 835 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 USP28Q96RU2 1077 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 PLIN2Q99541 437 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 KIFC3Q9BVG8 833 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 EIF2AQ9BY44 585 aaKnown RBP12.78□□□□□ -0.36
C2CD3-217ENST00000542452 NFKBIZQ9BYH8 718 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 RAB34Q9BZG1 259 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 TMEM117Q9H0C3 514 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 FAM105AQ9NUU6 356 aa12.78□□□□□ -0.36
C2CD3-217ENST00000542452 TYW1Q9NV66 732 aaKnown RBP12.78□□□□□ -0.36
C2CD3-217ENST00000542452 TDRD15B5MCY1 1934 aaKnown RBP12.78□□□□□ -0.36
C2CD3-217ENST00000542452 LRRIQ4A6NIV6 560 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 INO80B-WBP1J3KQ70 363 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 B4GALT3O60512 393 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 CSPG5O95196 566 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 ITGB1P05556 798 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 ARF4P18085 180 aaPredicted RBP12.77□□□□□ -0.37
C2CD3-217ENST00000542452 PBX3P40426 434 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 PKP1Q13835 747 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 TFDP1Q14186 410 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 ZRSR1Q15695 479 aaKnown RBP12.77□□□□□ -0.37
C2CD3-217ENST00000542452 AGMOQ6ZNB7 445 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 CABP7Q86V35 215 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 CDR2LQ86X02 465 aaPredicted RBP12.77□□□□□ -0.37
C2CD3-217ENST00000542452 KLHL23Q8NBE8 558 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 COLGALT1Q8NBJ5 622 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 SMG8Q8ND04 991 aaKnown RBP12.77□□□□□ -0.37
C2CD3-217ENST00000542452 SLC17A8Q8NDX2 589 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 CCDC113Q9H0I3 377 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 ALG13Q9NP73 1137 aaKnown RBP12.77□□□□□ -0.37
C2CD3-217ENST00000542452 DACT1Q9NYF0 836 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 LMCD1Q9NZU5 365 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 FBXO2Q9UK22 296 aaPredicted RBP12.77□□□□□ -0.37
C2CD3-217ENST00000542452 USP20Q9Y2K6 914 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 RWDD3Q9Y3V2 267 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 STK24Q9Y6E0 443 aa12.77□□□□□ -0.37
C2CD3-217ENST00000542452 BMP15O95972 392 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 RB1P06400 928 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 MARCKSP29966 332 aaPredicted RBP12.76□□□□□ -0.37
C2CD3-217ENST00000542452 RAB27AP51159 221 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 AFF1P51825 1210 aaKnown RBP12.76□□□□□ -0.37
C2CD3-217ENST00000542452 RINT1Q6NUQ1 792 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 PPP4R3CPQ6ZMV5 832 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 C1orf186Q6ZWK4 172 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 USP49Q70CQ1 688 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 LRRC43Q8N309 656 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 SPRYD3Q8NCJ5 442 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 MRPL38Q96DV4 380 aaKnown RBP12.76□□□□□ -0.37
C2CD3-217ENST00000542452 C11orf84Q9BUA3 381 aaPredicted RBP12.76□□□□□ -0.37
C2CD3-217ENST00000542452 PLVAPQ9BX97 442 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 BLOC1S4Q9NUP1 217 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 PLAGL2Q9UPG8 496 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 PCDHB2Q9Y5E7 798 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 PCDHGC5Q9Y5F6 944 aa12.76□□□□□ -0.37
C2CD3-217ENST00000542452 HOXA2O43364 376 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 ZNF623O75123 536 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 HIP1RO75146 1068 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 ERLIN2O94905 339 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 EOMESO95936 686 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 IRS1P35568 1242 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 NAMPTP43490 491 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 SLC12A3P55017 1021 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 CEBPZQ03701 1054 aaKnown RBP12.75□□□□□ -0.37
C2CD3-217ENST00000542452 KARSQ15046 597 aaKnown RBP12.75□□□□□ -0.37
C2CD3-217ENST00000542452 SPECC1Q5M775 1068 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 FOXD4L5Q5VV16 416 aaPredicted RBP12.75□□□□□ -0.37
C2CD3-217ENST00000542452 TAS1R3Q7RTX0 852 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 MRPL10Q7Z7H8 261 aaKnown RBP12.75□□□□□ -0.37
C2CD3-217ENST00000542452 SPPL3Q8TCT6 385 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 FOXD4L4Q8WXT5 416 aaPredicted RBP12.75□□□□□ -0.37
C2CD3-217ENST00000542452 P2RX5Q93086 422 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 AK8Q96MA6 479 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 CLIC6Q96NY7 704 aa12.75□□□□□ -0.37
C2CD3-217ENST00000542452 CSRNP2Q9H175 543 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms