RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 XRCC6P12956 609 aaKnown RBP eCLIP18.28■□□□□ 0.52
CCND1-205ENST00000542367 PBX3P40426 434 aa18.28■□□□□ 0.52
CCND1-205ENST00000542367 DLX2Q07687 328 aaPredicted RBP18.28■□□□□ 0.52
CCND1-205ENST00000542367 MXD4Q14582 209 aaPredicted RBP18.28■□□□□ 0.52
CCND1-205ENST00000542367 PUS10Q3MIT2 529 aaKnown RBP18.28■□□□□ 0.52
CCND1-205ENST00000542367 CATSPER3Q86XQ3 398 aa18.28■□□□□ 0.52
CCND1-205ENST00000542367 LPPQ93052 612 aa18.28■□□□□ 0.52
CCND1-205ENST00000542367 PPP2R3CQ969Q6 453 aa18.28■□□□□ 0.52
CCND1-205ENST00000542367 ZNF558Q96NG5 402 aa18.28■□□□□ 0.52
CCND1-205ENST00000542367 TUFT1Q9NNX1 390 aa18.28■□□□□ 0.52
CCND1-205ENST00000542367 TLR9Q9NR96 1032 aa18.28■□□□□ 0.52
CCND1-205ENST00000542367 NOL7Q9UMY1 257 aaKnown RBP18.28■□□□□ 0.52
CCND1-205ENST00000542367 LINC01565O15544 149 aa18.27■□□□□ 0.52
CCND1-205ENST00000542367 ZNF623O75123 536 aa18.27■□□□□ 0.52
CCND1-205ENST00000542367 MED24O75448 989 aa18.27■□□□□ 0.52
CCND1-205ENST00000542367 U2AF2P26368 475 aaKnown RBP eCLIP18.27■□□□□ 0.52
CCND1-205ENST00000542367 ARL2P36404 184 aa18.27■□□□□ 0.52
CCND1-205ENST00000542367 TRAPPC10P48553 1259 aa18.27■□□□□ 0.52
CCND1-205ENST00000542367 RAB27AP51159 221 aa18.27■□□□□ 0.52
CCND1-205ENST00000542367 PTENP60484 403 aa18.27■□□□□ 0.52
CCND1-205ENST00000542367 ERVFC1P60507 584 aa18.27■□□□□ 0.52
CCND1-205ENST00000542367 PLCB3Q01970 1234 aa18.27■□□□□ 0.52
CCND1-205ENST00000542367 ADAM15Q13444 863 aa18.27■□□□□ 0.52
CCND1-205ENST00000542367 NBR1Q14596 966 aa18.27■□□□□ 0.52
CCND1-205ENST00000542367 RBM23Q86U06 439 aaKnown RBP18.27■□□□□ 0.52
CCND1-205ENST00000542367 TMX3Q96JJ7 454 aa18.27■□□□□ 0.52
CCND1-205ENST00000542367 PUF60Q9UHX1 559 aaKnown RBP18.27■□□□□ 0.52
CCND1-205ENST00000542367 NCOR1O75376 2440 aa18.27■□□□□ 0.51
CCND1-205ENST00000542367 MEIS3P2A8K0S8 358 aa18.26■□□□□ 0.51
CCND1-205ENST00000542367 CD2BP2O95400 341 aaKnown RBP18.26■□□□□ 0.51
CCND1-205ENST00000542367 HOXA11P31270 313 aaPredicted RBP18.26■□□□□ 0.51
CCND1-205ENST00000542367 NRIP1P48552 1158 aa18.26■□□□□ 0.51
CCND1-205ENST00000542367 TFDP1Q14186 410 aa18.26■□□□□ 0.51
CCND1-205ENST00000542367 FAM178BQ8IXR5 827 aa18.26■□□□□ 0.51
CCND1-205ENST00000542367 C4orf32Q8N8J7 132 aa18.26■□□□□ 0.51
CCND1-205ENST00000542367 ASAP3Q8TDY4 903 aa18.26■□□□□ 0.51
CCND1-205ENST00000542367 MRPS27Q92552 414 aaKnown RBP18.26■□□□□ 0.51
CCND1-205ENST00000542367 NACC1Q96RE7 527 aa18.26■□□□□ 0.51
CCND1-205ENST00000542367 POLR3CQ9BUI4 534 aaPredicted RBP18.26■□□□□ 0.51
CCND1-205ENST00000542367 MRPL9Q9BYD2 267 aaKnown RBP18.26■□□□□ 0.51
CCND1-205ENST00000542367 TLE6Q9H808 572 aa18.26■□□□□ 0.51
CCND1-205ENST00000542367 SPG21Q9NZD8 308 aa18.26■□□□□ 0.51
CCND1-205ENST00000542367 LZTS1Q9Y250 596 aa18.26■□□□□ 0.51
CCND1-205ENST00000542367 KIF3AQ9Y496 699 aa18.26■□□□□ 0.51
CCND1-205ENST00000542367 PCDHB2Q9Y5E7 798 aa18.26■□□□□ 0.51
CCND1-205ENST00000542367 USO1O60763 962 aaKnown RBP18.25■□□□□ 0.51
CCND1-205ENST00000542367 TBX10O75333 385 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 ERLIN2O94905 339 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 RPA1P27694 616 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 PPM1AP35813 382 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 TOB1P50616 345 aaPredicted RBP18.25■□□□□ 0.51
CCND1-205ENST00000542367 KRT17Q04695 432 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 POU5F1BQ06416 359 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 CAPSQ13938 189 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 CLUL1Q15846 466 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 GLB1LQ6UWU2 654 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 MAEAQ7L5Y9 396 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 ERMNQ8TAM6 284 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 PGBD4Q96DM1 585 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 CD320Q9NPF0 282 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 INPP5FQ9Y2H2 1132 aa18.25■□□□□ 0.51
CCND1-205ENST00000542367 NT5C1B-RDH14C9J2C7 533 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 INO80B-WBP1J3KQ70 363 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 FSCN2O14926 492 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 PER2O15055 1255 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 OFD1O75665 1012 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 GLRA2P23416 452 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 ALDH7A1P49419 539 aaKnown RBP18.24■□□□□ 0.51
CCND1-205ENST00000542367 NDUFV1P49821 464 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 BCAR1P56945 870 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 NOMO2Q5JPE7 1267 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 UBXN11Q5T124 520 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 PDE12Q6L8Q7 609 aaKnown RBP18.24■□□□□ 0.51
CCND1-205ENST00000542367 AGMOQ6ZNB7 445 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 MRPL10Q7Z7H8 261 aaKnown RBP18.24■□□□□ 0.51
CCND1-205ENST00000542367 IFNLR1Q8IU57 520 aaPredicted RBP18.24■□□□□ 0.51
CCND1-205ENST00000542367 SLC39A11Q8N1S5 342 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 EFHBQ8N7U6 833 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 RSPH1Q8WYR4 309 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 TBC1D32Q96NH3 1257 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 POLR3FQ9H1D9 316 aaPredicted RBP18.24■□□□□ 0.51
CCND1-205ENST00000542367 DBR1Q9UK59 544 aaKnown RBP18.24■□□□□ 0.51
CCND1-205ENST00000542367 FAM50BQ9Y247 325 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 PCDHB6Q9Y5E3 794 aa18.24■□□□□ 0.51
CCND1-205ENST00000542367 TSPAN1O60635 241 aa18.23■□□□□ 0.51
CCND1-205ENST00000542367 FXR2P51116 673 aaKnown RBP eCLIP18.23■□□□□ 0.51
CCND1-205ENST00000542367 PTGDRQ13258 359 aa18.23■□□□□ 0.51
CCND1-205ENST00000542367 PCBP1Q15365 356 aaKnown RBP eCLIP18.23■□□□□ 0.511e-6■■□□□ 14.3
CCND1-205ENST00000542367 PLPP4Q5VZY2 271 aa18.23■□□□□ 0.51
CCND1-205ENST00000542367 MCTP1Q6DN14 999 aa18.23■□□□□ 0.51
CCND1-205ENST00000542367 POTEGQ6S5H5 508 aa18.23■□□□□ 0.51
CCND1-205ENST00000542367 CPB2Q96IY4 423 aa18.23■□□□□ 0.51
CCND1-205ENST00000542367 TCF25Q9BQ70 676 aa18.23■□□□□ 0.51
CCND1-205ENST00000542367 NRDE2Q9H7Z3 1164 aa18.23■□□□□ 0.51
CCND1-205ENST00000542367 GPRC5CQ9NQ84 441 aa18.23■□□□□ 0.51
CCND1-205ENST00000542367 ENTPD7Q9NQZ7 604 aa18.23■□□□□ 0.51
CCND1-205ENST00000542367 TBC1D13Q9NVG8 400 aa18.23■□□□□ 0.51
CCND1-205ENST00000542367 MBTPS2O43462 519 aa18.22■□□□□ 0.51
CCND1-205ENST00000542367 ZC3H11AO75152 810 aaKnown RBP eCLIP18.22■□□□□ 0.51
CCND1-205ENST00000542367 GJB2P29033 226 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms