RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 C11orf84Q9BUA3 381 aaPredicted RBP22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 FAM105AQ9NUU6 356 aa22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 RNF19AQ9NV58 838 aa22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 CLIC4Q9Y696 253 aa22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 EYSQ5T1H1 3165 aa22.26■■□□□ 1.15
CACNA2D4-215ENST00000542340 PRRC2BQ5JSZ5 2229 aaKnown RBP22.25■■□□□ 1.15
CACNA2D4-215ENST00000542340 ATF7P17544 494 aaPredicted RBP22.25■■□□□ 1.15
CACNA2D4-215ENST00000542340 MBTD1Q05BQ5 628 aa22.25■■□□□ 1.15
CACNA2D4-215ENST00000542340 NCBP1Q09161 790 aaKnown RBP22.25■■□□□ 1.15
CACNA2D4-215ENST00000542340 PTPAQ15257 358 aa22.25■■□□□ 1.15
CACNA2D4-215ENST00000542340 ZRSR1Q15695 479 aaKnown RBP22.25■■□□□ 1.15
CACNA2D4-215ENST00000542340 FAM173BQ6P4H8 233 aa22.25■■□□□ 1.15
CACNA2D4-215ENST00000542340 KCNK18Q7Z418 384 aa22.25■■□□□ 1.15
CACNA2D4-215ENST00000542340 ABI1Q8IZP0 508 aa22.25■■□□□ 1.15
CACNA2D4-215ENST00000542340 RNF169Q8NCN4 708 aa22.25■■□□□ 1.15
CACNA2D4-215ENST00000542340 KIFAP3Q92845 792 aa22.25■■□□□ 1.15
CACNA2D4-215ENST00000542340 CASD1Q96PB1 797 aa22.25■■□□□ 1.15
CACNA2D4-215ENST00000542340 PNMA5Q96PV4 448 aa22.25■■□□□ 1.15
CACNA2D4-215ENST00000542340 RALGAPA2Q2PPJ7 1873 aa22.24■■□□□ 1.15
CACNA2D4-215ENST00000542340 LRRIQ4A6NIV6 560 aa22.24■■□□□ 1.15
CACNA2D4-215ENST00000542340 TSPAN1O60635 241 aa22.24■■□□□ 1.15
CACNA2D4-215ENST00000542340 UBA7P41226 1012 aa22.24■■□□□ 1.15
CACNA2D4-215ENST00000542340 PPP2R5AQ15172 486 aa22.24■■□□□ 1.15
CACNA2D4-215ENST00000542340 PTPROQ16827 1216 aa22.24■■□□□ 1.15
CACNA2D4-215ENST00000542340 NAALADL2Q58DX5 795 aa22.24■■□□□ 1.15
CACNA2D4-215ENST00000542340 CABP7Q86V35 215 aa22.24■■□□□ 1.15
CACNA2D4-215ENST00000542340 MICALL1Q8N3F8 863 aa22.24■■□□□ 1.15
CACNA2D4-215ENST00000542340 RSPH1Q8WYR4 309 aa22.24■■□□□ 1.15
CACNA2D4-215ENST00000542340 P2RX5Q93086 422 aa22.24■■□□□ 1.15
CACNA2D4-215ENST00000542340 CDK5RAP3Q96JB5 506 aa22.24■■□□□ 1.15
CACNA2D4-215ENST00000542340 COL4A4P53420 1690 aaPredicted RBP22.23■■□□□ 1.15
CACNA2D4-215ENST00000542340 NAMPTP43490 491 aa22.23■■□□□ 1.15
CACNA2D4-215ENST00000542340 AMHR2Q16671 573 aa22.23■■□□□ 1.15
CACNA2D4-215ENST00000542340 CLLU1OSQ5K130 101 aa22.23■■□□□ 1.15
CACNA2D4-215ENST00000542340 CDCA2Q69YH5 1023 aaPredicted RBP22.23■■□□□ 1.15
CACNA2D4-215ENST00000542340 ZBTB8OSQ8IWT0 167 aa22.23■■□□□ 1.15
CACNA2D4-215ENST00000542340 MRPL38Q96DV4 380 aaKnown RBP22.23■■□□□ 1.15
CACNA2D4-215ENST00000542340 CCDC51Q96ER9 411 aa22.23■■□□□ 1.15
CACNA2D4-215ENST00000542340 C2orf40Q9H1Z8 148 aa22.23■■□□□ 1.15
CACNA2D4-215ENST00000542340 AAASQ9NRG9 546 aa22.23■■□□□ 1.15
CACNA2D4-215ENST00000542340 TYW1Q9NV66 732 aaKnown RBP22.23■■□□□ 1.15
CACNA2D4-215ENST00000542340 PCDHB2Q9Y5E7 798 aa22.23■■□□□ 1.15
CACNA2D4-215ENST00000542340 PRUNE2Q8WUY3 3088 aa22.23■■□□□ 1.15
CACNA2D4-215ENST00000542340 FNDC1Q4ZHG4 1894 aaPredicted RBP22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 NLRC5Q86WI3 1866 aa22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 GRIN1Q05586 938 aa22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 TMEM119Q4V9L6 283 aa22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 UBXN11Q5T124 520 aa22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 RINT1Q6NUQ1 792 aa22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 NOTUMQ6P988 496 aa22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 C1orf186Q6ZWK4 172 aa22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 MRPL10Q7Z7H8 261 aaKnown RBP22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 BSNDQ8WZ55 320 aa22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 PGBD4Q96DM1 585 aa22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 CALML4Q96GE6 196 aa22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 IFT74Q96LB3 600 aa22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 TIPINQ9BVW5 301 aa22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 LMAN2LQ9H0V9 348 aa22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 MORC2Q9Y6X9 1032 aaPredicted RBP22.22■■□□□ 1.15
CACNA2D4-215ENST00000542340 SPOUT1Q5T280 376 aaKnown RBP22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 PPP4R3CPQ6ZMV5 832 aa22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 LRRC43Q8N309 656 aa22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 SYT2Q8N9I0 419 aaPredicted RBP22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 CNNM3Q8NE01 707 aa22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 DEPTORQ8TB45 409 aa22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 HELQQ8TDG4 1101 aa22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 PRIMPOLQ96LW4 560 aa22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 USP28Q96RU2 1077 aa22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 PLIN2Q99541 437 aa22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 FZD8Q9H461 694 aa22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 CWH43Q9H720 699 aa22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 PRMT7Q9NVM4 692 aaPredicted RBP22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 PLAGL2Q9UPG8 496 aa22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 PCDHB12Q9Y5F1 795 aa22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 SRPRBQ9Y5M8 271 aaKnown RBP22.21■■□□□ 1.15
CACNA2D4-215ENST00000542340 ARF4P18085 180 aaPredicted RBP22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 LAG3P18627 525 aa22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 GUCY2CP25092 1073 aa22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 MARCKSP29966 332 aaPredicted RBP22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 CEBPZQ03701 1054 aaKnown RBP22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 SLC39A14Q15043 492 aa22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 FAM187BQ17R55 369 aa22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 CSPP1Q1MSJ5 1256 aa22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 LRRC55Q6ZSA7 311 aa22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 KLHL23Q8NBE8 558 aa22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 LPPQ93052 612 aa22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 RUSC1Q9BVN2 902 aa22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 MRPL9Q9BYD2 267 aaKnown RBP22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 CCSER1Q9C0I3 900 aa22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 CSRNP2Q9H175 543 aa22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 POLD4Q9HCU8 107 aa22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 KCND2Q9NZV8 630 aa22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 FBXO2Q9UK22 296 aaPredicted RBP22.2■■□□□ 1.14
CACNA2D4-215ENST00000542340 A0A1B0GUA9 196 aa22.19■■□□□ 1.14
CACNA2D4-215ENST00000542340 GRM6O15303 877 aa22.19■■□□□ 1.14
CACNA2D4-215ENST00000542340 B4GALT5O43286 388 aa22.19■■□□□ 1.14
CACNA2D4-215ENST00000542340 PLA2G4BP0C869 781 aa22.19■■□□□ 1.14
CACNA2D4-215ENST00000542340 ZSCAN22P10073 491 aaPredicted RBP22.19■■□□□ 1.14
CACNA2D4-215ENST00000542340 EFNA5P52803 228 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms