RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	IQCG	Q9H095	443 aa	Known RBP	13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	RSPH14	Q9UHP6	348 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	TACC3	Q9Y6A5	838 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328		A0A0G2JLL6	359 aa	Predicted RBP	13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	ATP2C2	O75185	946 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	ZNF667	Q5HYK9	610 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	LRRC71	Q8N4P6	559 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	BEST2	Q8NFU1	509 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	GDAP1L1	Q96MZ0	367 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	MAF1	Q9H063	256 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	C17orf102	A2RUQ5	167 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	KIAA1841	Q6NSI8	718 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	CYP4F22	Q6NT55	531 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	ADSSL1	Q8N142	457 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	STMN4	Q9H169	189 aa	Predicted RBP	13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	AMFR	Q9UKV5	643 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	IGSF9B	Q9UPX0	1349 aa		13.37	□□□□□ -0.27
ABCB8-222	ENST00000542328	TFRC	P02786	760 aa	Known RBP	13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	CTSH	P09668	335 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	VAMP7	P51809	220 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	LY6K	Q17RY6	165 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	WHAMMP3	Q1A5X7	153 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	PPP1R14C	Q8TAE6	165 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	UTP11	Q9Y3A2	253 aa	Known RBP	13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	CNTNAP1	P78357	1384 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	UBE4B	O95155	1302 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328		H3BRB1	525 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	HOXC6	P09630	235 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	GPC3	P51654	580 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	ZBED6	P86452	979 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	STK4	Q13043	487 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	HPS3	Q969F9	1004 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	SAAL1	Q96ER3	474 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	ZBED2	Q9BTP6	218 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	NACA2	Q9H009	215 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	TUT1	Q9H6E5	874 aa	Known RBP	13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	PIN4	Q9Y237	131 aa	Known RBP	13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	HPSE	Q9Y251	543 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	INPP5F	Q9Y2H2	1132 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	KCNK3	O14649	394 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	DSTYK	Q6XUX3	929 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	FAM76A	Q8TAV0	307 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	SENP7	Q9BQF6	1050 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	RBAK	Q9NYW8	714 aa	Predicted RBP	13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	LGALS16	A8MUM7	142 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	RPLP2	P05387	115 aa	Known RBP	13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	KCNH2	Q12809	1159 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	BFSP1	Q12934	665 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	OTOP1	Q7RTM1	612 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	SLC35F6	Q8N357	371 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	RPGRIP1	Q96KN7	1286 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	ASIC3	Q9UHC3	531 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	HYOU1	Q9Y4L1	999 aa		13.36	□□□□□ -0.27
ABCB8-222	ENST00000542328	EIF3D	O15371	548 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	FKTN	O75072	461 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	NSF	P46459	744 aa	Known RBP	13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	GCLM	P48507	274 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	PPP2R5C	Q13362	524 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	SARM1	Q6SZW1	724 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	DLK2	Q6UY11	383 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	GPR161	Q8N6U8	529 aa	Known RBP	13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	URGCP	Q8TCY9	931 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	ATP8B4	Q8TF62	1192 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	UBIAD1	Q9Y5Z9	338 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	PPFIA4	O75335	1185 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	AP3M2	P53677	418 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	HMX1	Q9NP08	348 aa	Predicted RBP	13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	PPME1	Q9Y570	386 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	LRRN2	O75325	713 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	RPS6KA5	O75582	802 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	SH3D19	Q5HYK7	790 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	PPP1R2P3	Q6NXS1	205 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	ZNF112	Q9UJU3	913 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	ANKRD36C	Q5JPF3	1778 aa		13.35	□□□□□ -0.27
ABCB8-222	ENST00000542328	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	SOWAHD	A6NJG2	315 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	ENC1	O14682	589 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	TCP1	P17987	556 aa	Known RBP	13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	CYP3A7	P24462	503 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	CYP2C19	P33261	490 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	EDRF1	Q3B7T1	1238 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	ANKRD40	Q6AI12	368 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	CCDC105	Q8IYK2	499 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	LRRC45	Q96CN5	670 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	APBA2	Q99767	749 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	HSD17B4	P51659	736 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	NLRP11	P59045	1033 aa	Known RBP	13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	SNRPF	P62306	86 aa	Known RBP	13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	PAK2	Q13177	524 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	FRMD5	Q7Z6J6	570 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	TLK2	Q86UE8	772 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	ACRBP	Q8NEB7	543 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	ACAP3	Q96P50	834 aa		13.34	□□□□□ -0.27
ABCB8-222	ENST00000542328	KBTBD4	Q9NVX7	518 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms