RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 FLOT1O75955 427 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 PYGMP11217 842 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 AKR1B1P15121 316 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 MYL5Q02045 173 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 PRKG1Q13976 671 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 PCSK7Q16549 785 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 CCDC153Q494R4 210 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 RTKN2Q8IZC4 609 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 KIAA1958Q8N8K9 716 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 MSANTD4Q8NCY6 345 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 VPS50Q96JG6 964 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 SIKE1Q9BRV8 207 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 TMEM60Q9H2L4 133 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 VIPAS39Q9H9C1 493 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 VCX3AQ9NNX9 186 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 BCS1LQ9Y276 419 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 PSME4Q14997 1843 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 DNM1LO00429 736 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 KCNJ13O60928 360 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 CD44P16070 742 aaKnown RBP11.96□□□□□ -0.49
CDH3-203ENST00000542274 CCNCP24863 283 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 GSDMDP57764 484 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 ATP2C1P98194 919 aaPredicted RBP11.96□□□□□ -0.49
CDH3-203ENST00000542274 SEPT2Q15019 361 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 SGSM1Q2NKQ1 1148 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 DALRD3Q5D0E6 543 aaKnown RBP11.96□□□□□ -0.49
CDH3-203ENST00000542274 NAA35Q5VZE5 725 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 HHIPL2Q6UWX4 724 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 RELL1Q8IUW5 271 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 ZNF579Q8NAF0 562 aaKnown RBP11.96□□□□□ -0.49
CDH3-203ENST00000542274 GOLM1Q8NBJ4 401 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 TDRD3Q9H7E2 651 aaKnown RBP11.96□□□□□ -0.49
CDH3-203ENST00000542274 SAMSN1Q9NSI8 373 aaKnown RBP11.96□□□□□ -0.49
CDH3-203ENST00000542274 NDFIP2Q9NV92 336 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 INTS13Q9NVM9 706 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 SEPT10Q9P0V9 454 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 STK39Q9UEW8 545 aa11.96□□□□□ -0.49
CDH3-203ENST00000542274 SERPINC1P01008 464 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 CCT6AP40227 531 aaKnown RBP11.95□□□□□ -0.5
CDH3-203ENST00000542274 CHMP4BP1P59074 171 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 VSNL1P62760 191 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 RASSF7Q02833 373 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 SCUBE1Q8IWY4 988 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 NLGN2Q8NFZ4 835 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 PAGE5Q96GU1 130 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 TRAPPC9Q96Q05 1148 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 CGREF1Q99674 301 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 HNRNPABQ99729 332 aaKnown RBP11.95□□□□□ -0.5
CDH3-203ENST00000542274 CCSER1Q9C0I3 900 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 CLK4Q9HAZ1 481 aaKnown RBP11.95□□□□□ -0.5
CDH3-203ENST00000542274 GTF3C4Q9UKN8 822 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 PCDHA6Q9UN73 950 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 TSC22D4Q9Y3Q8 395 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 PCDHA8Q9Y5H6 950 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 ALDH2P05091 517 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 DDX5P17844 614 aaKnown RBP11.95□□□□□ -0.5
CDH3-203ENST00000542274 KCNJ6P48051 423 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 SPRED3Q2MJR0 410 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 CFAP100Q494V2 611 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 TMTC4Q5T4D3 741 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 ANO7Q6IWH7 933 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 ZFPM2Q8WW38 1151 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 ATRIPQ8WXE1 791 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 ANKS1AQ92625 1134 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 SGCDQ92629 289 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 ZDHHC15Q96MV8 337 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 PIGSQ96S52 555 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 DNAI2Q9GZS0 605 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 OSBPL5Q9H0X9 879 aaPredicted RBP11.95□□□□□ -0.5
CDH3-203ENST00000542274 PCDHA4Q9UN74 947 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 PRLRP16471 622 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 UBASH3AP57075 661 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 DPYDQ12882 1025 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 MORC3Q14149 939 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 TRIM68Q6AZZ1 485 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 LRRC43Q8N309 656 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 NEDD1Q8NHV4 660 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 PRMT6Q96LA8 375 aaPredicted RBP11.95□□□□□ -0.5
CDH3-203ENST00000542274 LUC7L2Q9Y383 392 aaKnown RBP11.95□□□□□ -0.5
CDH3-203ENST00000542274 NFE2L3Q9Y4A8 694 aa11.95□□□□□ -0.5
CDH3-203ENST00000542274 SIPA1L1O43166 1804 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 FER1L6Q2WGJ9 1857 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 M0R2N6 131 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 IKBKBO14920 756 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 S100A1P23297 94 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 TGFB2P61812 414 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 KARSQ15046 597 aaKnown RBP11.94□□□□□ -0.5
CDH3-203ENST00000542274 MCF2L2Q86YR7 1114 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 C4orf32Q8N8J7 132 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 AGAP11Q8TF27 550 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 NAF1Q96HR8 494 aaKnown RBP11.94□□□□□ -0.5
CDH3-203ENST00000542274 SGIP1Q9BQI5 828 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 CARD9Q9H257 536 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 TCP11L1Q9NUJ3 509 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 TYW1Q9NV66 732 aaKnown RBP11.94□□□□□ -0.5
CDH3-203ENST00000542274 FAM198AQ9UFP1 575 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 CLRN2A0PK11 232 aa11.94□□□□□ -0.5
CDH3-203ENST00000542274 DDTLA6NHG4 134 aaPredicted RBP11.94□□□□□ -0.5
CDH3-203ENST00000542274 SP100P23497 879 aaPredicted RBP11.94□□□□□ -0.5
CDH3-203ENST00000542274 GSTT1P30711 240 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms