RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PLS3P13797 630 aa30.54■■■□□ 2.48
CCM2-218ENST00000541586 EEF1GP26641 437 aaKnown RBP30.54■■■□□ 2.48
CCM2-218ENST00000541586 ADAM17P78536 824 aa30.54■■■□□ 2.48
CCM2-218ENST00000541586 TLE2Q04725 743 aa30.54■■■□□ 2.48
CCM2-218ENST00000541586 CREBRFQ8IUR6 639 aa30.54■■■□□ 2.48
CCM2-218ENST00000541586 ANKRD20A12PQ8NF67 263 aa30.54■■■□□ 2.48
CCM2-218ENST00000541586 CEP89Q96ST8 783 aa30.54■■■□□ 2.48
CCM2-218ENST00000541586 MROH7Q68CQ1 1323 aa30.54■■■□□ 2.48
CCM2-218ENST00000541586 DCDC2CA8MYV0 355 aa30.53■■■□□ 2.48
CCM2-218ENST00000541586 TRIP12Q14669 1992 aaPredicted RBP30.53■■■□□ 2.48
CCM2-218ENST00000541586 NR1I3Q14994 352 aa30.53■■■□□ 2.48
CCM2-218ENST00000541586 ZC2HC1CQ53FD0 456 aaPredicted RBP30.53■■■□□ 2.48
CCM2-218ENST00000541586 EFCAB12Q6NXP0 572 aa30.53■■■□□ 2.48
CCM2-218ENST00000541586 FAM126BQ8IXS8 530 aa30.53■■■□□ 2.48
CCM2-218ENST00000541586 LRRC71Q8N4P6 559 aa30.53■■■□□ 2.48
CCM2-218ENST00000541586 SLC7A3Q8WY07 619 aa30.53■■■□□ 2.48
CCM2-218ENST00000541586 MAGEC2Q9UBF1 373 aaPredicted RBP30.53■■■□□ 2.48
CCM2-218ENST00000541586 C22orf31O95567 290 aa30.53■■■□□ 2.48
CCM2-218ENST00000541586 CYP2C9P11712 490 aa30.53■■■□□ 2.48
CCM2-218ENST00000541586 HOXC8P31273 242 aa30.53■■■□□ 2.48
CCM2-218ENST00000541586 SNX17Q15036 470 aa30.53■■■□□ 2.48
CCM2-218ENST00000541586 C1orf53Q5VUE5 145 aa30.53■■■□□ 2.48
CCM2-218ENST00000541586 LRRC55Q6ZSA7 311 aa30.53■■■□□ 2.48
CCM2-218ENST00000541586 FAM114A1Q8IWE2 563 aa30.53■■■□□ 2.48
CCM2-218ENST00000541586 MAGEB2O15479 319 aa30.52■■■□□ 2.48
CCM2-218ENST00000541586 CAPN15O75808 1086 aa30.52■■■□□ 2.48
CCM2-218ENST00000541586 KCNA1Q09470 495 aa30.52■■■□□ 2.48
CCM2-218ENST00000541586 RUFY4Q6ZNE9 571 aa30.52■■■□□ 2.48
CCM2-218ENST00000541586 MCPH1Q8NEM0 835 aa30.52■■■□□ 2.48
CCM2-218ENST00000541586 FAM49AQ9H0Q0 323 aaPredicted RBP30.52■■■□□ 2.48
CCM2-218ENST00000541586 ATP6V0A4Q9HBG4 840 aa30.52■■■□□ 2.48
CCM2-218ENST00000541586 XPNPEP1Q9NQW7 623 aa30.52■■■□□ 2.48
CCM2-218ENST00000541586 TLR3O15455 904 aaKnown RBP30.51■■■□□ 2.47
CCM2-218ENST00000541586 FGFR1OPO95684 399 aaKnown RBP30.51■■■□□ 2.47
CCM2-218ENST00000541586 MAPTP10636 758 aaKnown RBP30.51■■■□□ 2.47
CCM2-218ENST00000541586 COPB1P53618 953 aaKnown RBP30.51■■■□□ 2.47
CCM2-218ENST00000541586 FKBP3Q00688 224 aaKnown RBP30.51■■■□□ 2.47
CCM2-218ENST00000541586 PPP4R3CPQ6ZMV5 832 aa30.51■■■□□ 2.47
CCM2-218ENST00000541586 STXBP4Q6ZWJ1 553 aa30.51■■■□□ 2.47
CCM2-218ENST00000541586 ANKRD33Q7Z3H0 272 aa30.51■■■□□ 2.47
CCM2-218ENST00000541586 RETREG2Q8NC44 543 aa30.51■■■□□ 2.47
CCM2-218ENST00000541586 CNOT6LQ96LI5 555 aaKnown RBP30.51■■■□□ 2.47
CCM2-218ENST00000541586 STRA6Q9BX79 667 aa30.51■■■□□ 2.47
CCM2-218ENST00000541586 TAB2Q9NYJ8 693 aa30.51■■■□□ 2.47
CCM2-218ENST00000541586 UBE4BO95155 1302 aa30.51■■■□□ 2.47
CCM2-218ENST00000541586 MBLAC1A4D2B0 266 aaPredicted RBP30.5■■■□□ 2.47
CCM2-218ENST00000541586 MAFO75444 373 aaPredicted RBP30.5■■■□□ 2.47
CCM2-218ENST00000541586 CLCN3P51790 818 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 FILIP1LQ4L180 1135 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 TMC6Q7Z403 805 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 VSTM4Q8IW00 320 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 KIFAP3Q92845 792 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 DHX33Q9H6R0 707 aaKnown RBP30.5■■■□□ 2.47
CCM2-218ENST00000541586 RTN4Q9NQC3 1192 aaKnown RBP30.5■■■□□ 2.47
CCM2-218ENST00000541586 TRAF3IP3Q9Y228 551 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 PCDHB13Q9Y5F0 798 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 K7ENM7 598 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 PDXKO00764 312 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 RFC5P40937 340 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 EMC2Q15006 297 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 PTPN21Q16825 1174 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 EDRF1Q3B7T1 1238 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 CCDC186Q7Z3E2 898 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 FILIP1Q7Z7B0 1213 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 DNAJB3Q8WWF6 145 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 TMEM143Q96AN5 459 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 TOX2Q96NM4 488 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 VPS16Q9H269 839 aa30.5■■■□□ 2.47
CCM2-218ENST00000541586 TEX33O43247 280 aa30.49■■■□□ 2.47
CCM2-218ENST00000541586 PPP1R37O75864 691 aa30.49■■■□□ 2.47
CCM2-218ENST00000541586 CD4P01730 458 aa30.49■■■□□ 2.47
CCM2-218ENST00000541586 PEX3P56589 373 aa30.49■■■□□ 2.47
CCM2-218ENST00000541586 FAAP100Q0VG06 881 aa30.49■■■□□ 2.47
CCM2-218ENST00000541586 KSR1Q8IVT5 923 aa30.49■■■□□ 2.47
CCM2-218ENST00000541586 TYW1Q9NV66 732 aaKnown RBP30.49■■■□□ 2.47
CCM2-218ENST00000541586 PPME1Q9Y570 386 aa30.49■■■□□ 2.47
CCM2-218ENST00000541586 TMOD1P28289 359 aa30.48■■■□□ 2.47
CCM2-218ENST00000541586 DRP2Q13474 957 aa30.48■■■□□ 2.47
CCM2-218ENST00000541586 EXOC8Q8IYI6 725 aa30.48■■■□□ 2.47
CCM2-218ENST00000541586 JPH2Q9BR39 696 aaPredicted RBP30.48■■■□□ 2.47
CCM2-218ENST00000541586 ZMYM2Q9UBW7 1377 aa30.48■■■□□ 2.47
CCM2-218ENST00000541586 N4BP3O15049 544 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 SERINC5Q86VE9 423 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 ZC3H3Q8IXZ2 948 aaKnown RBP30.47■■■□□ 2.47
CCM2-218ENST00000541586 WNT8BQ93098 351 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 CEP63Q96MT8 703 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 HTATIP2Q9BUP3 242 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 C17orf75Q9HAS0 396 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 IMPACTQ9P2X3 320 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 AKT3Q9Y243 479 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 EVPLQ92817 2033 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 CALUO43852 315 aaPredicted RBP30.47■■■□□ 2.47
CCM2-218ENST00000541586 DNM2P50570 870 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 NCKAP1LP55160 1127 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 TMEM62Q0P6H9 643 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 PTK7Q13308 1070 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 ALCAMQ13740 583 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 PPP1R16BQ96T49 567 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 TUBGCP2Q9BSJ2 902 aa30.47■■■□□ 2.47
CCM2-218ENST00000541586 ST6GALNAC4Q9H4F1 302 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms