RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 BIRC2Q13490 618 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 PIN1Q13526 163 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-217ENST00000541578 SEPT7Q16181 437 aaKnown RBP5.44□□□□□ -1.54
SNHG1-217ENST00000541578 CYB5RLQ6IPT4 315 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 TIGD7Q6NT04 549 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-217ENST00000541578 RAVER1Q8IY67 606 aaKnown RBP5.44□□□□□ -1.54
SNHG1-217ENST00000541578 EXOC8Q8IYI6 725 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 BCL6BQ8N143 479 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-217ENST00000541578 CNTD1Q8N815 330 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 OR14K1Q8NGZ2 314 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 KRTAP4-11Q9BYQ6 195 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 MSL2Q9HCI7 577 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 KCMF1Q9P0J7 381 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 TRHDEQ9UKU6 1024 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 RIPOR2Q9Y4F9 1068 aa5.44□□□□□ -1.54
SNHG1-217ENST00000541578 PEG3Q9GZU2 1588 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 NEMP1O14524 444 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 H2AFYO75367 372 aaKnown RBP5.43□□□□□ -1.54
SNHG1-217ENST00000541578 RPS19P39019 145 aaKnown RBP5.43□□□□□ -1.54
SNHG1-217ENST00000541578 BRD3Q15059 726 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 CDSNQ15517 529 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 DGKDQ16760 1214 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 ATP13A4Q4VNC1 1196 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 SYDE2Q5VT97 1194 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 PRAMEF9Q5VWM5 478 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 KLHDC10Q6PID8 442 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 SLC4A10Q6U841 1118 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 HDGFL2Q7Z4V5 671 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-217ENST00000541578 ZZZ3Q8IYH5 903 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 FUKQ8N0W3 1084 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 NXPE1Q8N323 547 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 CFHR4Q92496 578 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 GFM2Q969S9 779 aaKnown RBP5.43□□□□□ -1.54
SNHG1-217ENST00000541578 HOOK2Q96ED9 719 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 GPR101Q96P66 508 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-217ENST00000541578 PLA2G12BQ9BX93 195 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 CCDC8Q9H0W5 538 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-217ENST00000541578 MAGEL2Q9UJ55 1249 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 ZNF180Q9UJW8 692 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 JAG2Q9Y219 1238 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 RIMBP3CA6NJZ7 1639 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 RIMBP3BA6NNM3 1639 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 RIMBP3Q9UFD9 1639 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 WASHC2AQ641Q2 1341 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 WDR62O43379 1518 aa5.43□□□□□ -1.54
SNHG1-217ENST00000541578 FAM83GA6ND36 823 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 MUSKO15146 869 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 MAFGO15525 162 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 AKAP10O43572 662 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 ULK1O75385 1050 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 SNUPNO95149 360 aaKnown RBP5.42□□□□□ -1.54
SNHG1-217ENST00000541578 FKBP9O95302 570 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 MYL1P05976 194 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 U2AF1L5P0DN76 240 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-217ENST00000541578 COMTP21964 271 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 KPNA1P52294 538 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-217ENST00000541578 BCAR1P56945 870 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 ANTXR2P58335 489 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 U2AF1Q01081 240 aaKnown RBP eCLIP5.42□□□□□ -1.546e-8■■■□□ 17.5
SNHG1-217ENST00000541578 DSG1Q02413 1049 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 HGFACQ04756 655 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 ADAM15Q13444 863 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 HLTFQ14527 1009 aaKnown RBP eCLIP5.42□□□□□ -1.54
SNHG1-217ENST00000541578 PTPN21Q16825 1174 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 CREB3L3Q68CJ9 461 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 ESRP1Q6NXG1 681 aaKnown RBP5.42□□□□□ -1.54
SNHG1-217ENST00000541578 LHFPL2Q6ZUX7 228 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 FKBP9P1Q75LS8 142 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 PALM2Q8IXS6 379 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 EFHBQ8N7U6 833 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 C7orf31Q8N865 590 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 OR5AN1Q8NGI8 311 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 SH3RF3Q8TEJ3 882 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-217ENST00000541578 COG1Q8WTW3 980 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 RPGRQ92834 1020 aaKnown RBP5.42□□□□□ -1.54
SNHG1-217ENST00000541578 LPPQ93052 612 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 OR14A2Q96R54 314 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 NELFAQ9H3P2 528 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 THG1LQ9NWX6 298 aaKnown RBP5.42□□□□□ -1.54
SNHG1-217ENST00000541578 H2AFY2Q9P0M6 372 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-217ENST00000541578 DENND2AQ9ULE3 1009 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 NOB1Q9ULX3 412 aaKnown RBP5.42□□□□□ -1.54
SNHG1-217ENST00000541578 TESMINQ9Y4I5 508 aa5.42□□□□□ -1.54
SNHG1-217ENST00000541578 CTDP1Q9Y5B0 961 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-217ENST00000541578 PMS2P1A4D2B8 440 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 ZNF891A8MT65 544 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-217ENST00000541578 SLC26A4O43511 780 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 APOL3O95236 402 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 MYBL2P10244 700 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 BPIP17213 487 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 GNALP38405 381 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 ADCY2Q08462 1091 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 R3HDM1Q15032 1099 aaKnown RBP5.41□□□□□ -1.54
SNHG1-217ENST00000541578 POLNQ7Z5Q5 900 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 SPRED1Q7Z699 444 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 PHYKPLQ8IUZ5 450 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 CHTF18Q8WVB6 975 aa5.41□□□□□ -1.54
SNHG1-217ENST00000541578 GCDHQ92947 438 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-217ENST00000541578 ADOQ96SZ5 270 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms