RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 EDRF1Q3B7T1 1238 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 CCDC105Q8IYK2 499 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 FAM20AQ96MK3 541 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 TAF1DQ9H5J8 278 aaPredicted RBP16.25■□□□□ 0.19
VARS2-211ENST00000541562 RIPK3Q9Y572 518 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 ALG6Q9Y672 507 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 PSMD10O75832 226 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 ZBTB7AO95365 584 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 MYZAPP0CAP1 466 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 AARSP49588 968 aaKnown RBP eCLIP16.25■□□□□ 0.19
VARS2-211ENST00000541562 ACOT2P49753 483 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 ITGB3BPQ13352 177 aaPredicted RBP16.25■□□□□ 0.19
VARS2-211ENST00000541562 TATDN1Q6P1N9 297 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 CCDC50Q8IVM0 306 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 ZBTB10Q96DT7 871 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 CNOT8Q9UFF9 292 aaKnown RBP16.25■□□□□ 0.19
VARS2-211ENST00000541562 PCDHGC5Q9Y5F6 944 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 NOVP48745 357 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 MTMR2Q13614 643 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 KAZNQ674X7 775 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 EMBQ6PCB8 327 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 NT5DC3Q86UY8 548 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 TRAF3IP3Q9Y228 551 aa16.25■□□□□ 0.19
VARS2-211ENST00000541562 MYH4Q9Y623 1939 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 SBF2Q86WG5 1849 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 LCA5LO95447 670 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 LSP1P33241 339 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 OSTNP61366 133 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 RPS6P62753 249 aaKnown RBP16.24■□□□□ 0.19
VARS2-211ENST00000541562 RASA3Q14644 834 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 FBXO25Q8TCJ0 367 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.24■□□□□ 0.191e-7■■■■□ 26.1
VARS2-211ENST00000541562 CD2APQ9Y5K6 639 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 COL5A3P25940 1745 aaPredicted RBP16.24■□□□□ 0.19
VARS2-211ENST00000541562 O00370 1275 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 EIF3HO15372 352 aaKnown RBP eCLIP16.24■□□□□ 0.191e-7■□□□□ 11
VARS2-211ENST00000541562 TTC31Q49AM3 519 aaPredicted RBP16.24■□□□□ 0.19
VARS2-211ENST00000541562 HAUS6Q7Z4H7 955 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 PPP1R13LQ8WUF5 828 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 NACC1Q96RE7 527 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 PCDHB18PQ96TA0 734 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 FAM213AQ9BRX8 229 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 ANKFY1Q9P2R3 1169 aa16.24■□□□□ 0.19
VARS2-211ENST00000541562 FOSP01100 380 aaPredicted RBP16.23■□□□□ 0.19
VARS2-211ENST00000541562 TUBBP07437 444 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 ADRB2P07550 413 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 COMTP21964 271 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 BFSP1Q12934 665 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 BIRC3Q13489 604 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 MTMR1Q13613 665 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 QPCTQ16769 361 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 ANKRD42Q8N9B4 389 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 SEMA4DQ92854 862 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 UTP11Q9Y3A2 253 aaKnown RBP16.23■□□□□ 0.19
VARS2-211ENST00000541562 SPDYE2BA6NHP3 402 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 SPDYE6P0CI01 402 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 VAMP7P51809 220 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 POMGNT1Q8WZA1 660 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 CNKSR1Q969H4 720 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 VIPAS39Q9H9C1 493 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 GRIN2DO15399 1336 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 CLDN3O15551 220 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 CAND2O75155 1236 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 GUCY2CP25092 1073 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 MTERF2Q49AM1 385 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 Q4G0T1 1027 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 SLC27A3Q5K4L6 730 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 OTUD6BQ8N6M0 293 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 LRRC57Q8N9N7 239 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 MKL1Q969V6 931 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 ZNF653Q96CK0 615 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 CCDC114Q96M63 670 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 RMDN3Q96TC7 470 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 PAIP2Q9BPZ3 127 aaKnown RBP16.23■□□□□ 0.19
VARS2-211ENST00000541562 HSPBP1Q9NZL4 362 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 APEX2Q9UBZ4 518 aa16.23■□□□□ 0.19
VARS2-211ENST00000541562 GOLGA8KD6RF30 607 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 KIAA0754O94854 1291 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 IFI35P80217 286 aaPredicted RBP16.22■□□□□ 0.19
VARS2-211ENST00000541562 DR1Q01658 176 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 PPATQ06203 517 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 WDR78Q5VTH9 848 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 EPM2AIP1Q7L775 607 aaPredicted RBP16.22■□□□□ 0.19
VARS2-211ENST00000541562 TAS1R2Q8TE23 839 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 NUCKS1Q9H1E3 243 aaKnown RBP16.22■□□□□ 0.19
VARS2-211ENST00000541562 C10orf88Q9H8K7 445 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 PSD3Q9NYI0 1048 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 MYH11P35749 1972 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 PI4K2BG5E9Z4 385 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 CSDE1O75534 798 aaKnown RBP16.22■□□□□ 0.19
VARS2-211ENST00000541562 TUBB4BP68371 445 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 HYIQ5T013 277 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 IQCKQ8N0W5 287 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 TMEM143Q96AN5 459 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 GDF3Q9NR23 364 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 LAMA2P24043 3122 aaKnown RBP16.22■□□□□ 0.19
VARS2-211ENST00000541562 NRAPQ86VF7 1730 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 TULP2O00295 520 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 CFHP08603 1231 aa16.22■□□□□ 0.19
VARS2-211ENST00000541562 ORC1Q13415 861 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms