RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 ARL8AQ96BM9 186 aa5.66□□□□□ -1.5
PRKDC-210ENST00000541488 ZNF496Q96IT1 587 aaPredicted RBP5.66□□□□□ -1.5
PRKDC-210ENST00000541488 UIMC1Q96RL1 719 aa5.66□□□□□ -1.5
PRKDC-210ENST00000541488 TCF25Q9BQ70 676 aa5.66□□□□□ -1.5
PRKDC-210ENST00000541488 SOX7Q9BT81 388 aa5.66□□□□□ -1.5
PRKDC-210ENST00000541488 ING3Q9NXR8 418 aa5.66□□□□□ -1.5
PRKDC-210ENST00000541488 USP35Q9P2H5 1018 aa5.66□□□□□ -1.5
PRKDC-210ENST00000541488 A0A0A6YYJ9 748 aa5.65□□□□□ -1.5
PRKDC-210ENST00000541488 STC2O76061 302 aa5.65□□□□□ -1.5
PRKDC-210ENST00000541488 CLEC2LP0C7M8 214 aa5.65□□□□□ -1.5
PRKDC-210ENST00000541488 VSIG10L2P0DP72 767 aa5.65□□□□□ -1.5
PRKDC-210ENST00000541488 SCNN1GP51170 649 aa5.65□□□□□ -1.5
PRKDC-210ENST00000541488 RRP1BQ14684 758 aaKnown RBP5.65□□□□□ -1.5
PRKDC-210ENST00000541488 LRCH2Q5VUJ6 765 aa5.65□□□□□ -1.5
PRKDC-210ENST00000541488 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-210ENST00000541488 DNAJC10Q8IXB1 793 aa5.65□□□□□ -1.5
PRKDC-210ENST00000541488 SMC1BQ8NDV3 1235 aa5.65□□□□□ -1.5
PRKDC-210ENST00000541488 MFSD3Q96ES6 412 aa5.65□□□□□ -1.5
PRKDC-210ENST00000541488 HIST1H2AHQ96KK5 128 aa5.65□□□□□ -1.5
PRKDC-210ENST00000541488 FEZ1Q99689 392 aa5.65□□□□□ -1.5
PRKDC-210ENST00000541488 HIST1H2AJQ99878 128 aa5.65□□□□□ -1.5
PRKDC-210ENST00000541488 ANO3Q9BYT9 981 aa5.65□□□□□ -1.5
PRKDC-210ENST00000541488 PITHD1Q9GZP4 211 aaPredicted RBP5.65□□□□□ -1.5
PRKDC-210ENST00000541488 REXO2Q9Y3B8 237 aaKnown RBP5.65□□□□□ -1.5
PRKDC-210ENST00000541488 MYPNQ86TC9 1320 aa5.65□□□□□ -1.51
PRKDC-210ENST00000541488 ST20-MTHFSA0A0A6YYL1 179 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 RPS6KA4O75676 772 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 POU3F2P20265 443 aaPredicted RBP5.64□□□□□ -1.51
PRKDC-210ENST00000541488 ADCYAP1R1P41586 468 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 KRTAP10-9P60411 292 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 ABHD18Q0P651 414 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 FAM214AQ32MH5 1076 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 FKBP15Q5T1M5 1219 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 ESPNLQ6ZVH7 1005 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 KIF18BQ86Y91 864 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 GSPT2Q8IYD1 628 aaKnown RBP5.64□□□□□ -1.51
PRKDC-210ENST00000541488 THEMISQ8N1K5 641 aaPredicted RBP5.64□□□□□ -1.51
PRKDC-210ENST00000541488 PPM1KQ8N3J5 372 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 PIK3C3Q8NEB9 887 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 OR2W6PQ8NHA6 318 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 ORAI3Q9BRQ5 295 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 EPC1Q9H2F5 836 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 SLC2A4RGQ9NR83 387 aa5.64□□□□□ -1.51
PRKDC-210ENST00000541488 PMS2P1A4D2B8 440 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 NARSO43776 548 aaKnown RBP5.63□□□□□ -1.51
PRKDC-210ENST00000541488 FAM20BO75063 409 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 FKBP9O95302 570 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 MYCLP1P12525 358 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-210ENST00000541488 KIR2DL3P43628 341 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 CD69Q07108 199 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 DPTQ07507 201 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 TUBA3CQ13748 450 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 CNGB1Q14028 1251 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-210ENST00000541488 TUBA3EQ6PEY2 450 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 FKBP9P1Q75LS8 142 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 AHI1Q8N157 1196 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 CACTINQ8WUQ7 758 aaKnown RBP5.63□□□□□ -1.51
PRKDC-210ENST00000541488 NEU4Q8WWR8 484 aaPredicted RBP5.63□□□□□ -1.51
PRKDC-210ENST00000541488 MPHOSPH9Q99550 1183 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 HAPLN2Q9GZV7 340 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 MMRN2Q9H8L6 949 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 C14orf93Q9H972 538 aaKnown RBP5.63□□□□□ -1.51
PRKDC-210ENST00000541488 MSL2Q9HCI7 577 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.63□□□□□ -1.51
PRKDC-210ENST00000541488 CEP72Q9P209 647 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 PCDHB6Q9Y5E3 794 aa5.63□□□□□ -1.51
PRKDC-210ENST00000541488 PRSS38A1L453 326 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 MAFGO15525 162 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 CYP27B1O15528 508 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 PDE8AO60658 829 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 RAB11FIP3O75154 756 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 FSBPO95073 299 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 CFBP00751 764 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 JUNP05412 331 aaKnown RBP5.62□□□□□ -1.51
PRKDC-210ENST00000541488 GAAP10253 952 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 HK1P19367 917 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 NPEPPSP55786 919 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 LRRC32Q14392 662 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 GAGE13Q4V321 117 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 TMPRSS6Q8IU80 811 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 CMTM4Q8IZR5 234 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 ANKRD35Q8N283 1001 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 UBR7Q8N806 425 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 ATXN2LQ8WWM7 1075 aaKnown RBP5.62□□□□□ -1.51
PRKDC-210ENST00000541488 MIEF2Q96C03 454 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 GPR87Q9BY21 358 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 EDARQ9UNE0 448 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 PPP2R3BQ9Y5P8 575 aa5.62□□□□□ -1.51
PRKDC-210ENST00000541488 KDM1AO60341 852 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 PPFIA2O75334 1257 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 ALDH1A2O94788 518 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 LSP1P33241 339 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 CASRP41180 1078 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 ID4P47928 161 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 PPARAQ07869 468 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 MGAT5Q09328 741 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 TERF2Q15554 542 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 DDB1Q16531 1140 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
PRKDC-210ENST00000541488 FNDC7Q5VTL7 733 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms