RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 MYBL1P10243 752 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 ACTN1P12814 892 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 TMOD1P28289 359 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 SMARCA1P28370 1054 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 COASYQ13057 564 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 BIRC2Q13490 618 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 POTEBQ6S5H4 581 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 FASTKD5Q7L8L6 764 aaKnown RBP15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 RMDN3Q96TC7 470 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 SLC40A1Q9NP59 571 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 GOLGA6L7A0A1B0GV03 622 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 ARP10275 920 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 CARSP49589 748 aaKnown RBP15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 ZNF473Q8WTR7 871 aaKnown RBP15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 CCT8L2Q96SF2 557 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 MAGEF1Q9HAY2 307 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 TARSL2A2RTX5 802 aaKnown RBP15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 TMCO5BA8MYB1 307 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 TCP1P17987 556 aaKnown RBP15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 NT5C2P49902 561 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 KLHL30Q0D2K2 578 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 GPBP1Q86WP2 473 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 STIM2Q9P246 746 aa15.56■□□□□ 0.08
SFSWAP-210ENST00000541286 TESPA1A2RU30 521 aaPredicted RBP15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 HEXIM1O94992 359 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 KLRC1P26715 233 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 FKBP1BP68106 108 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 MRPS9P82933 396 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 IFNL1Q8IU54 200 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 GUF1Q8N442 669 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 SPAG5Q96R06 1193 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 TLR10Q9BXR5 811 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 CYP39A1Q9NYL5 469 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 COL4A3BPQ9Y5P4 624 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 CHUKO15111 745 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 CYP4A11Q02928 519 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 PDXDC1Q6P996 788 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 MRPL11Q9Y3B7 192 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 ATP9AO75110 1047 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 GLI1P08151 1106 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 ITGB5P18084 799 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 ZNF76P36508 570 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 FKBP3Q00688 224 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 KCNMA1Q12791 1236 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 ADAM9Q13443 819 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 CFAP221Q4G0U5 840 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 PRAMEF19Q5SWL8 479 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 B4GALNT4Q76KP1 1039 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 AENQ8WTP8 325 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 THOC1Q96FV9 657 aaKnown RBP15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 SH3GL2Q99962 352 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 GINM1Q9NU53 330 aa15.55■□□□□ 0.08
SFSWAP-210ENST00000541286 CDH23Q9H251 3354 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 GBP2P32456 591 aaPredicted RBP15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 APLP1P51693 650 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 PABPC4Q13310 644 aaKnown RBP eCLIP15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 ACCSLQ4AC99 568 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 HAUS3Q68CZ6 603 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 LENG1Q96BZ8 264 aaPredicted RBP15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 STK17AQ9UEE5 414 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 A0A087X0T9 212 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 KCNK3O14649 394 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 ZBTB39O15060 712 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 FAM228BP0C875 321 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 OSBPP22059 807 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 ODF2Q5BJF6 829 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 LRRC55Q6ZSA7 311 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 MSL3Q8N5Y2 521 aaKnown RBP15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 BAP1Q92560 729 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 MTMR9Q96QG7 549 aa15.54■□□□□ 0.08
SFSWAP-210ENST00000541286 DOCK5Q9H7D0 1870 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 A0A1W2PQJ5 194 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 POTEFA5A3E0 1075 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 OPA1O60313 960 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 ZBTB48P10074 688 aaPredicted RBP15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 CFAP58Q5T655 872 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 KLHDC7AQ5VTJ3 777 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 POTEGQ6S5H5 508 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 TAF4BQ92750 862 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 HAS1Q92839 578 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 PCDH10Q9P2E7 1040 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 BAIAP2L1Q9UHR4 511 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 MCM8Q9UJA3 840 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 ZNF233A6NK53 670 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 HGSO14964 777 aaPredicted RBP15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 PPP1R2P41236 205 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 LRRC63Q05C16 580 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 SEPT14Q6ZU15 432 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 AP1M1Q9BXS5 423 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 ACAD9Q9H845 621 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 SYNPO2Q9UMS6 1093 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 PVALEFA0A1B0GWK0 134 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 SOWAHBA6NEL2 793 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 SFI1A8K8P3 1242 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 GOLGA8KD6RF30 607 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 CCL14Q16627 93 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 ARHGEF16Q5VV41 709 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 NLRP14Q86W24 1093 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 PDGFCQ9NRA1 345 aa15.53■□□□□ 0.08
SFSWAP-210ENST00000541286 TMEM150BA6NC51 233 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms