RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 TYRO3Q06418 890 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 CAPSQ13938 189 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 ZC2HC1CQ53FD0 456 aaPredicted RBP10.31□□□□□ -0.76
DDX55-208ENST00000541259 FAM26FQ5R3K3 315 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 ZNF658Q5TYW1 1059 aaPredicted RBP10.31□□□□□ -0.76
DDX55-208ENST00000541259 SASS6Q6UVJ0 657 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 SERINC5Q86VE9 423 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 ANKLE1Q8NAG6 615 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 KIAA0895Q8NCT3 520 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 PSPC1Q8WXF1 523 aaKnown RBP10.31□□□□□ -0.76
DDX55-208ENST00000541259 DHX38Q92620 1227 aaKnown RBP10.31□□□□□ -0.76
DDX55-208ENST00000541259 JPH2Q9BR39 696 aaPredicted RBP10.31□□□□□ -0.76
DDX55-208ENST00000541259 C11orf49Q9H6J7 331 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 CDHR5Q9HBB8 845 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 RMND1Q9NWS8 449 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 MAPK8IP1Q9UQF2 711 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 AKT3Q9Y243 479 aa10.31□□□□□ -0.76
DDX55-208ENST00000541259 LRRIQ4A6NIV6 560 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 PPP1R3GB7ZBB8 358 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 GPR32O75388 356 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 PRPF6O94906 941 aaKnown RBP10.3□□□□□ -0.76
DDX55-208ENST00000541259 TMOD1P28289 359 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 PRCPP42785 496 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 GPC3P51654 580 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 EMP3P54852 163 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 NCKAP1LP55160 1127 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 RTP1P59025 263 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 NLRP11P59045 1033 aaKnown RBP10.3□□□□□ -0.76
DDX55-208ENST00000541259 PSMD2Q13200 908 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 DPCR1Q3MIW9 517 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 C11orf57Q6ZUT1 292 aaPredicted RBP10.3□□□□□ -0.76
DDX55-208ENST00000541259 EPM2AIP1Q7L775 607 aaPredicted RBP10.3□□□□□ -0.76
DDX55-208ENST00000541259 ZNF720Q7Z2F6 126 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 FAM178BQ8IXR5 827 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 FAM126BQ8IXS8 530 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 TRIML1Q8N9V2 468 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 TMEM161BQ8NDZ6 487 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 SPIRE2Q8WWL2 714 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 CCDC47Q96A33 483 aaKnown RBP10.3□□□□□ -0.76
DDX55-208ENST00000541259 IFT74Q96LB3 600 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 NLRP4Q96MN2 994 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 NTPCRQ9BSD7 190 aaKnown RBP10.3□□□□□ -0.76
DDX55-208ENST00000541259 STRA6Q9BX79 667 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 IKZF4Q9H2S9 585 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 MRPL44Q9H9J2 332 aaKnown RBP10.3□□□□□ -0.76
DDX55-208ENST00000541259 KMT5AQ9NQR1 393 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 LARSQ9P2J5 1176 aaKnown RBP10.3□□□□□ -0.76
DDX55-208ENST00000541259 SEL1LQ9UBV2 794 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 TET1Q8NFU7 2136 aa10.3□□□□□ -0.76
DDX55-208ENST00000541259 TRIP11Q15643 1979 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 A0A087WZ62 844 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 K7ENM7 598 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 ASAP2O43150 1006 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 PQBP1O60828 265 aaKnown RBP10.29□□□□□ -0.76
DDX55-208ENST00000541259 CSDE1O75534 798 aaKnown RBP10.29□□□□□ -0.76
DDX55-208ENST00000541259 GCNT3O95395 438 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 CD4P01730 458 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 EDN1P05305 212 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 HOXD13P35453 343 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 NAMPTP43490 491 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 KCNA1Q09470 495 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 PTK7Q13308 1070 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 DMP1Q13316 513 aaPredicted RBP10.29□□□□□ -0.76
DDX55-208ENST00000541259 MXD4Q14582 209 aaPredicted RBP10.29□□□□□ -0.76
DDX55-208ENST00000541259 STX1AQ16623 288 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 LRRC26Q2I0M4 334 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 KIZQ2M2Z5 673 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 TSR1Q2NL82 804 aaKnown RBP10.29□□□□□ -0.76
DDX55-208ENST00000541259 TRIM71Q2Q1W2 868 aaKnown RBP10.29□□□□□ -0.76
DDX55-208ENST00000541259 TRIM60Q495X7 471 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 LRSAM1Q6UWE0 723 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 TAS1R3Q7RTX0 852 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 HAUS6Q7Z4H7 955 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 NECAB2Q7Z6G3 386 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 NELFCDQ8IXH7 590 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 RNF149Q8NC42 400 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 ZNF507Q8TCN5 953 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 SCFD1Q8WVM8 642 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 ABHD8Q96I13 439 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 MAP7D2Q96T17 732 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 FDXACB1Q9BRP7 624 aaPredicted RBP10.29□□□□□ -0.76
DDX55-208ENST00000541259 ADAM33Q9BZ11 813 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 OSBPL7Q9BZF2 842 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 DNAJC25Q9H1X3 360 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 ADAMTS10Q9H324 1103 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 MINDY3Q9H8M7 445 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 C17orf75Q9HAS0 396 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 IFT122Q9HBG6 1241 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 OLFML3Q9NRN5 406 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 NOD1Q9Y239 953 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 USP20Q9Y2K6 914 aa10.29□□□□□ -0.76
DDX55-208ENST00000541259 MKI67P46013 3256 aaKnown RBP10.28□□□□□ -0.76
DDX55-208ENST00000541259 DENND3A2RUS2 1198 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 CHRNA1P02708 482 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 CTSHP09668 335 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 CCDC192P0DO97 292 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 MAPTP10636 758 aaKnown RBP10.28□□□□□ -0.76
DDX55-208ENST00000541259 FGFR4P22455 802 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 THPOP40225 353 aa10.28□□□□□ -0.76
DDX55-208ENST00000541259 SMTNP53814 917 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms