RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 HPSEQ9Y251 543 aa20.74■□□□□ 0.91
VPS33A-205ENST00000541169 INO80B-WBP1J3KQ70 363 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 SLFN14P0C7P3 912 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 STAG3L1P0CL83 205 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 PFKFB1P16118 471 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 ATP2A2P16615 1042 aaKnown RBP20.73■□□□□ 0.91
VPS33A-205ENST00000541169 GAP43P17677 238 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 ZNF131P52739 623 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 SMAD3P84022 425 aaKnown RBP20.73■□□□□ 0.91
VPS33A-205ENST00000541169 DHX8Q14562 1220 aaKnown RBP20.73■□□□□ 0.91
VPS33A-205ENST00000541169 MAPK6Q16659 721 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 FAM187BQ17R55 369 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 PPP4R3CPQ6ZMV5 832 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 SLC24A5Q71RS6 500 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 DHX58Q96C10 678 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 REEP2Q9BRK0 252 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 TMEM134Q9H6X4 195 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 RGS18Q9NS28 235 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 MICAL3Q7RTP6 2002 aa20.73■□□□□ 0.91
VPS33A-205ENST00000541169 MYH11P35749 1972 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 A0A087X0B3 334 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 CCDC169A6NNP5 214 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 ENPP3O14638 875 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 FAM13AO94988 1023 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 SYKP43405 635 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 RAB27AP51159 221 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 MAPK7Q13164 816 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 GIT2Q14161 759 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 KANK3Q6NY19 840 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 APBB1IPQ7Z5R6 666 aaPredicted RBP20.72■□□□□ 0.91
VPS33A-205ENST00000541169 DAW1Q8N136 415 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 TMEM87AQ8NBN3 555 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 DDX12PQ92771 950 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 KMT5AQ9NQR1 393 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 AGPAT5Q9NUQ2 364 aa20.72■□□□□ 0.91
VPS33A-205ENST00000541169 K7ERI5 159 aa20.71■□□□□ 0.91
VPS33A-205ENST00000541169 MAPTP10636 758 aaKnown RBP20.71■□□□□ 0.91
VPS33A-205ENST00000541169 NPTX2P47972 431 aa20.71■□□□□ 0.91
VPS33A-205ENST00000541169 PEX3P56589 373 aa20.71■□□□□ 0.91
VPS33A-205ENST00000541169 MBTD1Q05BQ5 628 aa20.71■□□□□ 0.91
VPS33A-205ENST00000541169 RAB30Q15771 203 aa20.71■□□□□ 0.91
VPS33A-205ENST00000541169 FSIP1Q8NA03 581 aa20.71■□□□□ 0.91
VPS33A-205ENST00000541169 TOP1MTQ969P6 601 aa20.71■□□□□ 0.91
VPS33A-205ENST00000541169 ADAM2Q99965 735 aa20.71■□□□□ 0.91
VPS33A-205ENST00000541169 OSBPL7Q9BZF2 842 aa20.71■□□□□ 0.91
VPS33A-205ENST00000541169 FZD8Q9H461 694 aa20.71■□□□□ 0.91
VPS33A-205ENST00000541169 ELAC1Q9H777 363 aaKnown RBP20.71■□□□□ 0.91
VPS33A-205ENST00000541169 GDPD2Q9HCC8 539 aa20.71■□□□□ 0.91
VPS33A-205ENST00000541169 CXXC1Q9P0U4 656 aaPredicted RBP20.71■□□□□ 0.91
VPS33A-205ENST00000541169 ARHGAP28Q9P2N2 729 aa20.71■□□□□ 0.91
VPS33A-205ENST00000541169 A0A1B0GVL5 298 aa20.7■□□□□ 0.9
VPS33A-205ENST00000541169 DSC3Q14574 896 aa20.7■□□□□ 0.9
VPS33A-205ENST00000541169 NOTUMQ6P988 496 aa20.7■□□□□ 0.9
VPS33A-205ENST00000541169 CCDC65Q8IXS2 484 aa20.7■□□□□ 0.9
VPS33A-205ENST00000541169 MYCT1Q8N699 235 aa20.7■□□□□ 0.9
VPS33A-205ENST00000541169 CNNM3Q8NE01 707 aa20.7■□□□□ 0.9
VPS33A-205ENST00000541169 LRRC15Q8TF66 581 aa20.7■□□□□ 0.9
VPS33A-205ENST00000541169 CHAMP1Q96JM3 812 aa20.7■□□□□ 0.9
VPS33A-205ENST00000541169 ZNF668Q96K58 619 aaPredicted RBP20.7■□□□□ 0.9
VPS33A-205ENST00000541169 TMX1Q9H3N1 280 aa20.7■□□□□ 0.9
VPS33A-205ENST00000541169 PIN4Q9Y237 131 aaKnown RBP20.7■□□□□ 0.9
VPS33A-205ENST00000541169 A0A0U1RQF3 1178 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.69■□□□□ 0.9
VPS33A-205ENST00000541169 MYMKA6NI61 221 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 ACKR2O00590 384 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 HOXA2O43364 376 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 EOMESO95936 686 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 SARSP49591 514 aaKnown RBP20.69■□□□□ 0.9
VPS33A-205ENST00000541169 FAM189BP81408 668 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 RAD51AP2Q09MP3 1159 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 STRN3Q13033 797 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 GPR153Q6NV75 609 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 NPAS4Q8IUM7 802 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 HERC6Q8IVU3 1022 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 BSNDQ8WZ55 320 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 GBP4Q96PP9 640 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 C7orf25Q9BPX7 421 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 ST6GALNAC4Q9H4F1 302 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 MINDY3Q9H8M7 445 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 INSL6Q9Y581 213 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 PCDHA11Q9Y5I1 949 aa20.69■□□□□ 0.9
VPS33A-205ENST00000541169 C9IYK1 514 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 TRAK2O60296 914 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 GJB5O95377 273 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 NDUFA8P51970 172 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 NCKAP1LP55160 1127 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 PRPF4BQ13523 1007 aaKnown RBP20.68■□□□□ 0.9
VPS33A-205ENST00000541169 ALCAMQ13740 583 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 HABP4Q5JVS0 413 aaKnown RBP20.68■□□□□ 0.9
VPS33A-205ENST00000541169 TWF2Q6IBS0 349 aaKnown RBP20.68■□□□□ 0.9
VPS33A-205ENST00000541169 STXBP4Q6ZWJ1 553 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 FAM178BQ8IXR5 827 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 HACE1Q8IYU2 909 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 MYOCDQ8IZQ8 938 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 HVCN1Q96D96 273 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 ZBED2Q9BTP6 218 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 TRIM9Q9C026 710 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 CCDC113Q9H0I3 377 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 OLFML3Q9NRN5 406 aa20.68■□□□□ 0.9
VPS33A-205ENST00000541169 TMEM161AQ9NX61 479 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms